Literature DB >> 19199693

Water isotope effect on the phosphatidylcholine bilayer properties: a molecular dynamics simulation study.

Tomasz Róg1, Krzysztof Murzyn, Jeannine Milhaud, Mikko Karttunen, Marta Pasenkiewicz-Gierula.   

Abstract

Physicochemical properties of heavy water (D2O) differ to some extent from those of normal water. Substituting D2O for H2O has been shown to affect the structural and dynamic properties of proteins, but studies of its effects on lipid bilayers are scarce. In this paper, the atomic level molecular dynamics (MD) simulation method was used to determine the effects of this substitution on the properties of a dipalmitoylphosphatidylcholine (DPPC) bilayer and its hydrating water. MD simulations of two DPPC bilayers, one fully hydrated with H2O and the other with D2O, were carried out for over 50 ns. For H2O, the simple point charge (SPC) model was used, and for D2O, the extended SPC-HW model was employed. Analyses of the simulation trajectories indicate that several properties of the membrane core and the membrane/water interface are affected by replacing H2O by D2O. However, the time-averaged properties, such as membrane compactness, acyl chain order, and numbers of PC-water H (D)-bonds and PC-PC water bridges, are much less affected than time-resolved properties. In particular, the lifetimes of these interactions are much longer for D2O molecules than for H2O ones. These longer lifetimes results in a slightly better ordering of the D2O molecules and average self-diffusion, which is 50% slower compared with the H2O molecules. This large isotope effect has been assigned to the repercussions of the longer lived D-bonding to DPPC headgroups insofar as all water molecules sense the presence of the DPPC bilayer.

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Year:  2009        PMID: 19199693     DOI: 10.1021/jp8048235

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  6 in total

1.  Dynamic Water Hydrogen-Bond Networks at the Interface of a Lipid Membrane Containing Palmitoyl-Oleoyl Phosphatidylglycerol.

Authors:  Konstantina Karathanou; Ana-Nicoleta Bondar
Journal:  J Membr Biol       Date:  2018-03-09       Impact factor: 1.843

2.  A Parameterization of Cholesterol for Mixed Lipid Bilayer Simulation within the Amber Lipid14 Force Field.

Authors:  Benjamin D Madej; Ian R Gould; Ross C Walker
Journal:  J Phys Chem B       Date:  2015-09-11       Impact factor: 2.991

3.  Investigating the Structure of Multicomponent Gel-Phase Lipid Bilayers.

Authors:  Remco Hartkamp; Timothy C Moore; Christopher R Iacovella; Michael A Thompson; Pallav A Bulsara; David J Moore; Clare McCabe
Journal:  Biophys J       Date:  2016-08-23       Impact factor: 4.033

4.  A statistical mechanical theory for a two-dimensional model of water.

Authors:  Tomaz Urbic; Ken A Dill
Journal:  J Chem Phys       Date:  2010-06-14       Impact factor: 3.488

5.  Measuring the mutual diffusion coefficient of heavy water in normal water using a double liquid-core cylindrical lens.

Authors:  Weidong Meng; Yan Xia; Yan Chen; Xiaoyun Pu
Journal:  Sci Rep       Date:  2018-08-22       Impact factor: 4.379

6.  Lipid/water interface of galactolipid bilayers in different lyotropic liquid-crystalline phases.

Authors:  Jakub Hryc; Robert Szczelina; Michal Markiewicz; Marta Pasenkiewicz-Gierula
Journal:  Front Mol Biosci       Date:  2022-08-15
  6 in total

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