Literature DB >> 19193999

Crystallization and preliminary X-ray diffraction analysis of a complex between the electron-transfer partners hexameric Cu-containing nitrite reductase and pseudoazurin.

Daisuke Hira1, Masaki Nojiri, Shinnichiro Suzuki.   

Abstract

The complex between Cu-containing nitrite reductase (HdNIR) and its electron-donor protein pseudoazurin (HdPAz) from Hyphomicrobium denitrificans has been crystallized. The crystals were obtained from a mixture of the two proteins using the hanging-drop vapour-diffusion method in the presence of polyethylene glycol (PEG) and 2-methyl-2,4-pentanediol (MPD) as precipitants. SDS-PAGE analysis demonstrated that the crystals contained both proteins. The X-ray diffraction experiment was carried out at SPring-8 and diffraction data were collected to 3.3 A resolution. The crystals were tetragonal (space group P4(1)2(1)2), with unit-cell parameters a = b = 130.39, c = 505.55 A. Preliminary analysis indicated that there was one HdNIR and at least two HdPAz molecules in the asymmetric unit of the crystal.

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Year:  2009        PMID: 19193999      PMCID: PMC2635864          DOI: 10.1107/S1744309108040219

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  22 in total

1.  Pushing the boundaries of molecular replacement with maximum likelihood.

Authors:  R J Read
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2001-09-21

2.  Characterization of two type 1 Cu sites of Hyphomicrobium denitrificans nitrite reductase: a new class of copper-containing nitrite reductases.

Authors:  Kazuya Yamaguchi; Kunishige Kataoka; Mayuko Kobayashi; Koushi Itoh; Atsushi Fukui; Shinnichiro Suzuki
Journal:  Biochemistry       Date:  2004-11-09       Impact factor: 3.162

3.  Pseudoazurin-nitrite reductase interactions.

Authors:  Antonietta Impagliazzo; Ludwig Krippahl; Marcellus Ubbink
Journal:  Chembiochem       Date:  2005-09       Impact factor: 3.164

4.  Crystal structure of an electron-transfer complex between methylamine dehydrogenase and amicyanin.

Authors:  L Chen; R Durley; B J Poliks; K Hamada; Z Chen; F S Mathews; V L Davidson; Y Satow; E Huizinga; F M Vellieux
Journal:  Biochemistry       Date:  1992-06-02       Impact factor: 3.162

5.  Redox-state-dependent complex formation between pseudoazurin and nitrite reductase.

Authors:  Antonietta Impagliazzo; Anneloes J Blok; Matthew J Cliff; John E Ladbury; Marcellus Ubbink
Journal:  J Am Chem Soc       Date:  2007-01-10       Impact factor: 15.419

6.  Crystal structure determinations of oxidized and reduced pseudoazurins from Achromobacter cycloclastes. Concerted movement of copper site in redox forms with the rearrangement of hydrogen bond at a remote histidine.

Authors:  T Inoue; N Nishio; S Suzuki; K Kataoka; T Kohzuma; Y Kai
Journal:  J Biol Chem       Date:  1999-06-18       Impact factor: 5.157

7.  Crystal structure of an electron transfer complex between aromatic amine dehydrogenase and azurin from Alcaligenes faecalis.

Authors:  Narayanasami Sukumar; Zhi-wei Chen; Davide Ferrari; Angelo Merli; Gian Luigi Rossi; Henry D Bellamy; Andrei Chistoserdov; Victor L Davidson; F Scott Mathews
Journal:  Biochemistry       Date:  2006-11-14       Impact factor: 3.162

8.  Spectroscopic and functional characterization of Cu-containing nitrite reductase from Hyphomicrobium denitrificans A3151.

Authors:  Ryoichi Fukunaga; Kunishige Kataoka; Kazuya Yamaguchi; Kazuo Kobayashi; Seiichi Tagawa; Shinnichiro Suzuki
Journal:  J Inorg Biochem       Date:  2002-07-25       Impact factor: 4.155

9.  Structure and function of a hexameric copper-containing nitrite reductase.

Authors:  Masaki Nojiri; Yong Xie; Tsuyoshi Inoue; Takahiko Yamamoto; Hiroyoshi Matsumura; Kunishige Kataoka; Kazuya Yamaguchi; Yasushi Kai; Shinnichiro Suzuki
Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-05       Impact factor: 11.205

10.  Structures of a blue-copper nitrite reductase and its substrate-bound complex.

Authors:  F E Dodd; S S Hasnain; Z H Abraham; R R Eady; B E Smith
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1997-07-01
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  1 in total

1.  New molecular packing in a crystal of pseudoazurin from Alcaligenes faecalis: a double-helical arrangement of blue copper.

Authors:  Yohta Fukuda; Eiichi Mizohata; Tsuyoshi Inoue
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2017-02-28       Impact factor: 1.056

  1 in total

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