Literature DB >> 19193630

Identification of familial and de novo microduplications of 22q11.21-q11.23 distal to the 22q11.21 microdeletion syndrome region.

Justine Coppinger1, Donna McDonald-McGinn, Elaine Zackai, Kate Shane, Joan F Atkin, Alexander Asamoah, Robert Leland, David D Weaver, Susan Lansky-Shafer, Karen Schmidt, Heidi Feldman, William Cohen, Judy Phalin, Berkley Powell, Blake C Ballif, Aaron Theisen, Elizabeth Geiger, Chad Haldeman-Englert, Tamim H Shaikh, Sulagna Saitta, Bassem A Bejjani, Lisa G Shaffer.   

Abstract

Deletions of the 22q11.2 region distal to the 22q11.21 microdeletion syndrome region have recently been described in individuals with mental retardation and congenital anomalies. Because these deletions are mediated by low-copy repeats (LCRs), located distal to the 22q11.21 DiGeorge/velocardiofacial microdeletion region, duplications are predicted to occur with a frequency equal to the deletion. However, few microduplications of this region have been reported. We report the identification of 18 individuals with microduplications of 22q11.21-q11.23. The duplication boundaries for all individuals are within LCRs distal to the DiGeorge/velocardiofacial microdeletion region. Clinical records for nine subjects reveal shared characteristics, but also several examples of contradicting clinical features (e.g. macrocephaly versus microcephaly and upslanting versus downslanting palpebral fissures). Of 12 cases for whom parental DNA samples were available for testing, one is de novo and 11 inherited the microduplication from a parent, three of whom reportedly have learning problems or developmental delay. The variable phenotypes and preponderance of familial cases obfuscate the clinical relevance of the molecular data and emphasize the need for careful parental assessments and clinical correlations.

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Year:  2009        PMID: 19193630      PMCID: PMC2664143          DOI: 10.1093/hmg/ddp042

Source DB:  PubMed          Journal:  Hum Mol Genet        ISSN: 0964-6906            Impact factor:   6.150


  31 in total

1.  A palindrome-mediated mechanism distinguishes translocations involving LCR-B of chromosome 22q11.2.

Authors:  Anthony L Gotter; Tamim H Shaikh; Marcia L Budarf; C Harker Rhodes; Beverly S Emanuel
Journal:  Hum Mol Genet       Date:  2003-11-12       Impact factor: 6.150

2.  Homologous recombination of a flanking repeat gene cluster is a mechanism for a common contiguous gene deletion syndrome.

Authors:  K S Chen; P Manian; T Koeuth; L Potocki; Q Zhao; A C Chinault; C C Lee; J R Lupski
Journal:  Nat Genet       Date:  1997-10       Impact factor: 38.330

3.  A novel 22q11.2 microdeletion in DiGeorge syndrome.

Authors:  A Rauch; R A Pfeiffer; G Leipold; H Singer; M Tigges; M Hofbeck
Journal:  Am J Hum Genet       Date:  1999-02       Impact factor: 11.025

Review 4.  Charcot-Marie-Tooth disease: lessons in genetic mechanisms.

Authors:  J R Lupski
Journal:  Mol Med       Date:  1998-01       Impact factor: 6.354

5.  A duplicated gene in the breakpoint regions of the 7q11.23 Williams-Beuren syndrome deletion encodes the initiator binding protein TFII-I and BAP-135, a phosphorylation target of BTK.

Authors:  L A Pérez Jurado; Y K Wang; R Peoples; A Coloma; J Cruces; U Francke
Journal:  Hum Mol Genet       Date:  1998-03       Impact factor: 6.150

6.  Molecular characterization of de novo secondary trisomy 13.

Authors:  L G Shaffer; C McCaskill; J Y Han; K H Choo; D M Cutillo; A E Donnenfeld; L Weiss; D L Van Dyke
Journal:  Am J Hum Genet       Date:  1994-11       Impact factor: 11.025

7.  Full spectrum of malformations in velo-cardio-facial syndrome/DiGeorge syndrome mouse models by altering Tbx1 dosage.

Authors:  Jun Liao; Lazaros Kochilas; Sonja Nowotschin; Jelena S Arnold; Vimla S Aggarwal; Jonathan A Epstein; M Christian Brown; Joe Adams; Bernice E Morrow
Journal:  Hum Mol Genet       Date:  2004-06-09       Impact factor: 6.150

8.  A new genomic duplication syndrome complementary to the velocardiofacial (22q11 deletion) syndrome.

Authors:  S J Hassed; D Hopcus-Niccum; L Zhang; S Li; J J Mulvihill
Journal:  Clin Genet       Date:  2004-05       Impact factor: 4.438

9.  Two autosomal dominant neuropathies result from reciprocal DNA duplication/deletion of a region on chromosome 17.

Authors:  P F Chance; N Abbas; M W Lensch; L Pentao; B B Roa; P I Patel; J R Lupski
Journal:  Hum Mol Genet       Date:  1994-02       Impact factor: 6.150

10.  Microduplication 22q11.2, an emerging syndrome: clinical, cytogenetic, and molecular analysis of thirteen patients.

Authors:  Regina E Ensenauer; Adewale Adeyinka; Heather C Flynn; Virginia V Michels; Noralane M Lindor; D Brian Dawson; Erik C Thorland; Cindy Pham Lorentz; Jennifer L Goldstein; Marie T McDonald; Wendy E Smith; Elba Simon-Fayard; Alan A Alexander; Anita S Kulharya; Rhett P Ketterling; Robin D Clark; Syed M Jalal
Journal:  Am J Hum Genet       Date:  2003-10-02       Impact factor: 11.025

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  19 in total

1.  Sixteen New Cases Contributing to the Characterization of Patients with Distal 22q11.2 Microduplications.

Authors:  J Wincent; D L Bruno; B W M van Bon; A Bremer; H Stewart; E M H F Bongers; C W Ockeloen; M H Willemsen; D D A Keays; G Baird; D F Newbury; T Kleefstra; C Marcelis; U Kini; Z Stark; R Savarirayan; L J Sheffield; O Zuffardi; H R Slater; B B de Vries; S J L Knight; B-M Anderlid; J Schoumans
Journal:  Mol Syndromol       Date:  2011-05-18

2.  Prevalence and complications of single-gene and chromosomal disorders in craniosynostosis.

Authors:  Andrew O M Wilkie; Jo C Byren; Jane A Hurst; Jayaratnam Jayamohan; David Johnson; Samantha J L Knight; Tracy Lester; Peter G Richards; Stephen R F Twigg; Steven A Wall
Journal:  Pediatrics       Date:  2010-07-19       Impact factor: 7.124

3.  Effect of copy number variants on outcomes for infants with single ventricle heart defects.

Authors:  Abigail S Carey; Li Liang; Jonathan Edwards; Tracy Brandt; Hui Mei; Andrew J Sharp; Daphne T Hsu; Jane W Newburger; Richard G Ohye; Wendy K Chung; Mark W Russell; Jill A Rosenfeld; Lisa G Shaffer; Michael K Parides; Lisa Edelmann; Bruce D Gelb
Journal:  Circ Cardiovasc Genet       Date:  2013-09-10

4.  Microdeletions and microduplications in patients with congenital heart disease and multiple congenital anomalies.

Authors:  Elizabeth Goldmuntz; Prasuna Paluru; Joseph Glessner; Hakon Hakonarson; Jaclyn A Biegel; Peter S White; Xiaowu Gai; Tamim H Shaikh
Journal:  Congenit Heart Dis       Date:  2011-10-20       Impact factor: 2.007

5.  Genotype and phenotype spectrum of NRAS germline variants.

Authors:  Franziska Altmüller; Christina Lissewski; Debora Bertola; Elisabetta Flex; Zornitza Stark; Stephanie Spranger; Gareth Baynam; Michelle Buscarilli; Sarah Dyack; Jane Gillis; Helger G Yntema; Francesca Pantaleoni; Rosa LE van Loon; Sara MacKay; Kym Mina; Ina Schanze; Tiong Yang Tan; Maie Walsh; Susan M White; Marena R Niewisch; Sixto García-Miñaúr; Diego Plaza; Mohammad Reza Ahmadian; Hélène Cavé; Marco Tartaglia; Martin Zenker
Journal:  Eur J Hum Genet       Date:  2017-05-03       Impact factor: 4.246

Review 6.  Phenotypic variability and genetic susceptibility to genomic disorders.

Authors:  Santhosh Girirajan; Evan E Eichler
Journal:  Hum Mol Genet       Date:  2010-08-31       Impact factor: 6.150

7.  Cross-sectional and longitudinal findings in patients with proximal 22q11.2 duplication: A retrospective chart study.

Authors:  Jente Verbesselt; Inge Zink; Jeroen Breckpot; Ann Swillen
Journal:  Am J Med Genet A       Date:  2021-09-07       Impact factor: 2.802

8.  Comparative analysis of copy number detection by whole-genome BAC and oligonucleotide array CGH.

Authors:  Nicholas J Neill; Beth S Torchia; Bassem A Bejjani; Lisa G Shaffer; Blake C Ballif
Journal:  Mol Cytogenet       Date:  2010-06-29       Impact factor: 2.009

9.  Cognitive deficit, learning difficulties, severe behavioral abnormalities and healed cleft lip in a patient with a 1.2-mb distal microduplication at 22q11.2.

Authors:  L A Ribeiro-Bicudo; C de Campos Legnaro; B F Gamba; R M Candido Sandri; A Richieri-Costa
Journal:  Mol Syndromol       Date:  2013-08-17

10.  Spatiotemporal 22q11.21 Protein Network Implicates DGCR8-Dependent MicroRNA Biogenesis as a Risk for Late-Fetal Cortical Development in Psychiatric Diseases.

Authors:  Liang Chen; Wenxiang Cai; Weidi Wang; Zhe Liu; Guan Ning Lin
Journal:  Life (Basel)       Date:  2021-05-31
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