Literature DB >> 19186143

Small anion with higher valency retards the compaction of DNA in the presence of multivalent cation.

Takuya Saito1, Takafumi Iwaki, Kenichi Yoshikawa.   

Abstract

It has been established that, upon the addition of multivalent cations, long DNA chains in an aqueous solution exhibit a remarkable discrete transition from a coil state to a compact state at the level of a single chain. In this study, we investigated the polyelectrolyte nature of DNA with the experimental methodology of single-DNA observation, and provide a theoretical interpretation. We examined the effects of co-ions with different valencies (Cl(-), SO4(2-), PO4(3-)) on DNA compaction. As a result, we found that co-ions with a greater valency induce the coil state rather than the compact state. Based on a simple model with mean-field approximation that considered ion pairing, we show how the increase in entropy of small ions contributes to the stability of the compact state, by overcoming entropic penalties such as elastic confinement of the chain and a decrease in the translational freedom of counterions accompanied by charge neutralization.

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Year:  2009        PMID: 19186143      PMCID: PMC2716645          DOI: 10.1016/j.bpj.2008.11.008

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  7 in total

1.  Thermodynamics of DNA binding and condensation: isothermal titration calorimetry and electrostatic mechanism.

Authors:  D Matulis; I Rouzina; V A Bloomfield
Journal:  J Mol Biol       Date:  2000-03-03       Impact factor: 5.469

2.  Large discrete transition in a single DNA molecule appears continuous in the ensemble.

Authors: 
Journal:  Phys Rev Lett       Date:  1996-04-15       Impact factor: 9.161

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Authors:  Y Yamasaki; Y Teramoto; K Yoshikawa
Journal:  Biophys J       Date:  2001-06       Impact factor: 4.033

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Journal:  Nature       Date:  1976-01-29       Impact factor: 49.962

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Authors:  G S Manning
Journal:  Q Rev Biophys       Date:  1978-05       Impact factor: 5.318

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Authors:  R W Wilson; V A Bloomfield
Journal:  Biochemistry       Date:  1979-05-29       Impact factor: 3.162

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Authors:  J Widom; R L Baldwin
Journal:  J Mol Biol       Date:  1980-12-25       Impact factor: 5.469

  7 in total
  2 in total

1.  Dependence of DNA condensation on the correlation distance between condensed counterions.

Authors:  Yanhui Liu; Wenbo Wang; Lin Hu
Journal:  J Biol Phys       Date:  2012-08-03       Impact factor: 1.365

2.  Salt effects on condensed protamine-DNA assemblies: anion binding and weakening of attraction.

Authors:  Jason E DeRouchey; Donald C Rau
Journal:  J Phys Chem B       Date:  2011-09-23       Impact factor: 2.991

  2 in total

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