Literature DB >> 19182542

MAPK signaling in equations and embryos.

Stanislav Y Shvartsman1, Mathieu Coppey, Alexander M Berezhkovskii.   

Abstract

The Extracellularly Regulated Kinase/Mitogen Activated Protein Kinase (ERK/MAPK) signaling pathway is a critical regulator of cellular processes in adult and developing tissues. Depending on the cellular context, MAPK cascade can act as a rheostat, a switch, or an oscillator. The highly conserved structure of the cascade does not imply a rigid function, as was suggested by the early mathematical models of MAPK signaling, and can instead produce a wide range of input-output maps. Given a large number of pathway components and modes of regulation, it is essential to establish experimental systems that will allow both manipulating the MAPK cascade and monitoring its dynamics. The terminal patterning system in the Drosophila embryo appears to be ideally suited for this purpose. Our recent experiments characterized dynamics of the MAPK phosphorylation gradient in the terminal system and proposed that it is regulated by a cascade of diffusion-trapping modules. Here we discuss a biophysical model that can describe the observed dynamics and guide future experiments for exploring the relative importance of multiple layers of MAPK cascade regulation.

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Year:  2009        PMID: 19182542      PMCID: PMC2712890          DOI: 10.4161/fly.3.1.7776

Source DB:  PubMed          Journal:  Fly (Austin)        ISSN: 1933-6934            Impact factor:   2.160


  39 in total

1.  Relief of gene repression by torso RTK signaling: role of capicua in Drosophila terminal and dorsoventral patterning.

Authors:  G Jiménez; A Guichet; A Ephrussi; J Casanova
Journal:  Genes Dev       Date:  2000-01-15       Impact factor: 11.361

2.  Negative feedback and ultrasensitivity can bring about oscillations in the mitogen-activated protein kinase cascades.

Authors:  B N Kholodenko
Journal:  Eur J Biochem       Date:  2000-03

3.  Signaling gradients in cascades of two-state reaction-diffusion systems.

Authors:  Alexander M Berezhkovskii; Mathieu Coppey; Stanislav Y Shvartsman
Journal:  Proc Natl Acad Sci U S A       Date:  2009-01-15       Impact factor: 11.205

Review 4.  Systems analysis of MAPK signal transduction.

Authors:  Nils Blüthgen; Stefan Legewie
Journal:  Essays Biochem       Date:  2008       Impact factor: 8.000

5.  FGF induces oscillations of Hes1 expression and Ras/ERK activation.

Authors:  Kei Nakayama; Takayuki Satoh; Aiko Igari; Ryoichiro Kageyama; Eisuke Nishida
Journal:  Curr Biol       Date:  2008-04-22       Impact factor: 10.834

6.  Nuclear trapping shapes the terminal gradient in the Drosophila embryo.

Authors:  Mathieu Coppey; Alistair N Boettiger; Alexander M Berezhkovskii; Stanislav Y Shvartsman
Journal:  Curr Biol       Date:  2008-06-24       Impact factor: 10.834

7.  Oscillatory phosphorylation of yeast Fus3 MAP kinase controls periodic gene expression and morphogenesis.

Authors:  Zoe Hilioti; Walid Sabbagh; Saurabh Paliwal; Adriel Bergmann; Marcus D Goncalves; Lee Bardwell; Andre Levchenko
Journal:  Curr Biol       Date:  2008-10-30       Impact factor: 10.834

8.  Membrane localization of scaffold proteins promotes graded signaling in the yeast MAP kinase cascade.

Authors:  Satoe Takahashi; Peter M Pryciak
Journal:  Curr Biol       Date:  2008-08-26       Impact factor: 10.834

9.  Plasma membrane polarity and compartmentalization are established before cellularization in the fly embryo.

Authors:  Manos Mavrakis; Richa Rikhy; Jennifer Lippincott-Schwartz
Journal:  Dev Cell       Date:  2009-01       Impact factor: 12.270

10.  Spatiotemporal regulation of ERK2 by dual specificity phosphatases.

Authors:  Christopher J Caunt; Stephen P Armstrong; Caroline A Rivers; Michael R Norman; Craig A McArdle
Journal:  J Biol Chem       Date:  2008-07-23       Impact factor: 5.157

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  4 in total

Review 1.  MAP kinase modules: the excursion model and the steps that count.

Authors:  Alexander T Piala; John M Humphreys; Elizabeth J Goldsmith
Journal:  Biophys J       Date:  2014-11-04       Impact factor: 4.033

Review 2.  The latest progress in research on triple negative breast cancer (TNBC): risk factors, possible therapeutic targets and prognostic markers.

Authors:  Qingli Jiao; Aiguo Wu; Guoli Shao; Haoyu Peng; Mengchuan Wang; Shufeng Ji; Peng Liu; Jian Zhang
Journal:  J Thorac Dis       Date:  2014-09       Impact factor: 2.895

3.  Plasticity of the MAPK signaling network in response to mechanical stress.

Authors:  Andrea M Pereira; Cicerone Tudor; Philippe-Alexandre Pouille; Shashank Shekhar; Johannes S Kanger; Vinod Subramaniam; Enrique Martín-Blanco
Journal:  PLoS One       Date:  2014-07-15       Impact factor: 3.240

4.  Cluster expansion of apolipoprotein D (ApoD) genes in teleost fishes.

Authors:  Langyu Gu; Canwei Xia
Journal:  BMC Evol Biol       Date:  2019-01-08       Impact factor: 3.260

  4 in total

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