Literature DB >> 19181516

The bacteriophage lambda CI protein finds an asymmetric solution.

Ann Hochschild1, Mitchell Lewis.   

Abstract

The CI protein of bacteriophage lambda (lambdaCI) is both a repressor and activator of transcription that has served as a model for understanding how gene regulatory proteins work. A dimeric DNA-binding protein, lambdaCI also forms higher-order oligomers that allow it to bind cooperatively to both adjacent and nonadjacent operator sites within the phage genome. The ability of phage lambda to transition efficiently from one program of gene expression to another depends upon the formation of these higher-order protein-DNA complexes. A recently determined crystal structure of a DNA-bound lambdaCI dimer reveals that the two subunits of the dimer adopt different conformations. This unexpected asymmetry helps explain how these higher-order complexes are assembled.

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Year:  2009        PMID: 19181516      PMCID: PMC2684985          DOI: 10.1016/j.sbi.2008.12.008

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  37 in total

1.  Octamerization of lambda CI repressor is needed for effective repression of P(RM) and efficient switching from lysogeny.

Authors:  I B Dodd; A J Perkins; D Tsemitsidis; J B Egan
Journal:  Genes Dev       Date:  2001-11-15       Impact factor: 11.361

2.  Quantitative kinetic analysis of the bacteriophage lambda genetic network.

Authors:  Oren Kobiler; Assaf Rokney; Nir Friedman; Donald L Court; Joel Stavans; Amos B Oppenheim
Journal:  Proc Natl Acad Sci U S A       Date:  2005-02-22       Impact factor: 11.205

3.  Role of the lytic repressor in prophage induction of phage lambda as analyzed by a module-replacement approach.

Authors:  Shota Atsumi; John W Little
Journal:  Proc Natl Acad Sci U S A       Date:  2006-03-14       Impact factor: 11.205

4.  The essential role of the cro gene in lytic development by bacteriophage lambda.

Authors:  A Folkmanis; W Maltzman; P Mellon; A Skalka; H Echols
Journal:  Virology       Date:  1977-09       Impact factor: 3.616

5.  Cooperative binding of lambda repressors to sites separated by integral turns of the DNA helix.

Authors:  A Hochschild; M Ptashne
Journal:  Cell       Date:  1986-03-14       Impact factor: 41.582

6.  Identification of the functional subunit of a dimeric transcription activator protein by use of oriented heterodimers.

Authors:  Y Zhou; S Busby; R H Ebright
Journal:  Cell       Date:  1993-04-23       Impact factor: 41.582

7.  Specificity determinants for the interaction of lambda repressor and P22 repressor dimers.

Authors:  F W Whipple; N H Kuldell; L A Cheatham; A Hochschild
Journal:  Genes Dev       Date:  1994-05-15       Impact factor: 11.361

8.  Gene regulation at the right operator (OR) bacteriophage lambda. I. OR3 and autogenous negative control by repressor.

Authors:  R Maurer; B Meyer; M Ptashne
Journal:  J Mol Biol       Date:  1980-05-15       Impact factor: 5.469

Review 9.  lambda Repressor and cro--components of an efficient molecular switch.

Authors:  A D Johnson; A R Poteete; G Lauer; R T Sauer; G K Ackers; M Ptashne
Journal:  Nature       Date:  1981-11-19       Impact factor: 49.962

10.  Cro regulatory protein specified by bacteriophage lambda. Structure, DNA-binding, and repression of RNA synthesis.

Authors:  Y Takeda; A Folkmanis; H Echols
Journal:  J Biol Chem       Date:  1977-09-10       Impact factor: 5.157

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  17 in total

1.  Crystal structure of TtgV in complex with its DNA operator reveals a general model for cooperative DNA binding of tetrameric gene regulators.

Authors:  Duo Lu; Sandy Fillet; Cuixiang Meng; Yilmaz Alguel; Patrik Kloppsteck; Julien Bergeron; Tino Krell; Mari-Trini Gallegos; Juan Ramos; Xiaodong Zhang
Journal:  Genes Dev       Date:  2010-11-15       Impact factor: 11.361

2.  Dynamics simulations for engineering macromolecular interactions.

Authors:  Avi Robinson-Mosher; Tamar Shinar; Pamela A Silver; Jeffrey Way
Journal:  Chaos       Date:  2013-06       Impact factor: 3.642

Review 3.  The TetR family of regulators.

Authors:  Leslie Cuthbertson; Justin R Nodwell
Journal:  Microbiol Mol Biol Rev       Date:  2013-09       Impact factor: 11.056

4.  Inhibition of Cell Differentiation in Bacillus subtilis by Pseudomonas protegens.

Authors:  Matthew J Powers; Edgardo Sanabria-Valentín; Albert A Bowers; Elizabeth A Shank
Journal:  J Bacteriol       Date:  2015-03-30       Impact factor: 3.490

5.  RS1 satellite phage promotes diversity of toxigenic Vibrio cholerae by driving CTX prophage loss and elimination of lysogenic immunity.

Authors:  M Kamruzzaman; William Paul Robins; S M Nayeemul Bari; Shamsun Nahar; John J Mekalanos; Shah M Faruque
Journal:  Infect Immun       Date:  2014-06-16       Impact factor: 3.441

6.  Exposing the secrets of two well-known Lactobacillus casei phages, J-1 and PL-1, by genomic and structural analysis.

Authors:  Maria Eugenia Dieterle; Charles Bowman; Carlos Batthyany; Esteban Lanzarotti; Adrián Turjanski; Graham Hatfull; Mariana Piuri
Journal:  Appl Environ Microbiol       Date:  2014-09-12       Impact factor: 4.792

7.  PrtR homeostasis contributes to Pseudomonas aeruginosa pathogenesis and resistance against ciprofloxacin.

Authors:  Ziyu Sun; Jing Shi; Chang Liu; Yongxin Jin; Kewei Li; Ronghao Chen; Shouguang Jin; Weihui Wu
Journal:  Infect Immun       Date:  2014-02-03       Impact factor: 3.441

8.  Intracellular directed evolution of proteins from combinatorial libraries based on conditional phage replication.

Authors:  Andreas K Brödel; Alfonso Jaramillo; Mark Isalan
Journal:  Nat Protoc       Date:  2017-08-10       Impact factor: 13.491

Review 9.  Molecular interactions and protein-induced DNA hairpin in the transcriptional control of bacteriophage ø29 DNA.

Authors:  Ana Camacho; Margarita Salas
Journal:  Int J Mol Sci       Date:  2010-12-13       Impact factor: 5.923

Review 10.  Phage satellites and their emerging applications in biotechnology.

Authors:  Rodrigo Ibarra-Chávez; Mads Frederik Hansen; Rafael Pinilla-Redondo; Kimberley D Seed; Urvish Trivedi
Journal:  FEMS Microbiol Rev       Date:  2021-11-23       Impact factor: 15.177

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