Literature DB >> 19175088

Texture classification-based segmentation of lung affected by interstitial pneumonia in high-resolution CT.

Panayiotis Korfiatis1, Christina Kalogeropoulou, Anna Karahaliou, Alexandra Kazantzi, Spyros Skiadopoulos, Lena Costaridou.   

Abstract

Accurate and automated lung field (LF) segmentation in high-resolution computed tomography (HRCT) is highly challenged by the presence of pathologies affecting lung borders, also affecting the performance of computer-aided diagnosis (CAD) schemes. In this work, a two-dimensional LF segmentation algorithm adapted to interstitial pneumonia (IP) patterns is presented. The algorithm employs k-means clustering followed by a filling operation to obtain an initial LF order estimate. The final LF border is obtained by an iterative support vector machine neighborhood labeling of border pixels based on gray level and wavelet coefficient statistics features. A second feature set based on gray level averaging and gradient features was also investigated to evaluate its effect on segmentation performance of the proposed method. The proposed method is evaluated on a dataset of 22 HRCT cases spanning a range of IP patterns such as ground glass, reticular, and honeycombing. The accuracy of the method is assessed using area overlap and shape differentiation metrics (d(mean), d(rms), and d(max)), by comparing automatically derived lung borders to manually traced ones, and further compared to a gray level thresholding-based (GLT-based) method. Accuracy of the methods evaluated is also compared to interobserver variability. The proposed method incorporating gray level and wavelet coefficient statistics demonstrated the highest segmentation accuracy, averaged over left and right LFs (overlap=0.954, d(mean)=1.080 mm, d(rms)=1.407 mm, and d(max)=4.944 mm), which is statistically significant (two-tailed student's t test for paired data, p<0.0083) with respect to all metrics considered as compared to the proposed method incorporating gray level averaging and gradient features (overlap=0.918, d(mean)=2.354 mm, d(rms)=3.711 mm, and d(max)=14.412 mm) and the GLT-based method (overlap=0.897, d(mean)=3.618 mm, d(rms)=5.007 mm, and d(max)=16.893 mm). The performance of the three segmentation methods, although decreased as IP pattern severity level (mild, moderate, and severe) was increased, did not demonstrate statistically significant difference (two-tailed student's t test for unpaired data, p>0.0167 for all metrics considered). Finally, the accuracy of the proposed method, based on gray level and wavelet coefficient statistics ranges within interobserver variability. The proposed segmentation method could be used as an initial stage of a CAD scheme for IP patterns.

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Year:  2008        PMID: 19175088     DOI: 10.1118/1.3003066

Source DB:  PubMed          Journal:  Med Phys        ISSN: 0094-2405            Impact factor:   4.071


  16 in total

1.  Computer-aided diagnosis for phase-contrast X-ray computed tomography: quantitative characterization of human patellar cartilage with high-dimensional geometric features.

Authors:  Mahesh B Nagarajan; Paola Coan; Markus B Huber; Paul C Diemoz; Christian Glaser; Axel Wismüller
Journal:  J Digit Imaging       Date:  2014-02       Impact factor: 4.056

2.  Automatic lung segmentation using control feedback system: morphology and texture paradigm.

Authors:  Norliza M Noor; Joel C M Than; Omar M Rijal; Rosminah M Kassim; Ashari Yunus; Amir A Zeki; Michele Anzidei; Luca Saba; Jasjit S Suri
Journal:  J Med Syst       Date:  2015-02-10       Impact factor: 4.460

3.  Automated 3D ιnterstitial lung disease εxtent quantification: performance evaluation and correlation to PFTs.

Authors:  Alexandra Kazantzi; Lena Costaridou; Spyros Skiadopoulos; Panayiotis Korfiatis; Anna Karahaliou; Dimitris Daoussis; Andreas Andonopoulos; Christina Kalogeropoulou
Journal:  J Digit Imaging       Date:  2014-06       Impact factor: 4.056

4.  Computer-aided detection of early interstitial lung diseases using low-dose CT images.

Authors:  Sang Cheol Park; Jun Tan; Xingwei Wang; Dror Lederman; Joseph K Leader; Soo Hyung Kim; Bin Zheng
Journal:  Phys Med Biol       Date:  2011-01-25       Impact factor: 3.609

5.  Computer-aided diagnosis in phase contrast imaging X-ray computed tomography for quantitative characterization of ex vivo human patellar cartilage.

Authors:  Mahesh B Nagarajan; Paola Coan; Markus B Huber; Paul C Diemoz; Christian Glaser; Axel Wismuller
Journal:  IEEE Trans Biomed Eng       Date:  2013-06-05       Impact factor: 4.538

6.  Texture feature ranking with relevance learning to classify interstitial lung disease patterns.

Authors:  Markus B Huber; Kerstin Bunte; Mahesh B Nagarajan; Michael Biehl; Lawrence A Ray; Axel Wismüller
Journal:  Artif Intell Med       Date:  2012-09-23       Impact factor: 5.326

Review 7.  Computer-assisted detection of infectious lung diseases: a review.

Authors:  Ulaş Bağcı; Mike Bray; Jesus Caban; Jianhua Yao; Daniel J Mollura
Journal:  Comput Med Imaging Graph       Date:  2011-07-01       Impact factor: 4.790

8.  Automated segmentation of lungs with severe interstitial lung disease in CT.

Authors:  Jiahui Wang; Feng Li; Qiang Li
Journal:  Med Phys       Date:  2009-10       Impact factor: 4.071

9.  Inter-observer Variability Analysis of Automatic Lung Delineation in Normal and Disease Patients.

Authors:  Luca Saba; Joel C M Than; Norliza M Noor; Omar M Rijal; Rosminah M Kassim; Ashari Yunus; Chue R Ng; Jasjit S Suri
Journal:  J Med Syst       Date:  2016-04-25       Impact factor: 4.460

10.  Automatic lung segmentation in routine imaging is primarily a data diversity problem, not a methodology problem.

Authors:  Johannes Hofmanninger; Forian Prayer; Jeanny Pan; Sebastian Röhrich; Helmut Prosch; Georg Langs
Journal:  Eur Radiol Exp       Date:  2020-08-20
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