Literature DB >> 19168628

Export of RNA silencing from C. elegans tissues does not require the RNA channel SID-1.

Antony M Jose1, Jessica J Smith, Craig P Hunter.   

Abstract

Double-stranded RNA (dsRNA) triggers RNA interference (RNAi) to silence genes of matching sequence. In some animals this experimentally induced silencing is transported between cells, and studies in the nematode Caenorhabditis elegans have shown that the dsRNA channel SID-1 is required for the import of such transported silencing signals. Gene silencing can also be triggered by endogenously expressed RNAi triggers, but it is unknown whether such silencing is transported between cells. Here, we show that, in C. elegans, SID-1 is required for efficient silencing of multicopy transgenes, indicating that mobile silencing signals contribute to transgene silencing. Further, most tissues can transport silencing initiated by the tissue-specific transgenic expression of RNAi triggers to other tissues, consistent with expressed RNAi triggers generating mobile silencing signals. Whereas the import of silencing signals requires SID-1, we found that mobile silencing signals generated by transgene-expressed RNAi triggers are exported to other tissues through a SID-1-independent mechanism. Furthermore, when RNAi triggers are expressed in ingested Escherichia coli, silencing signals can be transported to internal tissues from the gut lumen across gut cells that lack SID-1. Thus, C. elegans can transport endogenous and exogenous RNA silencing signals between many different tissues via at least 2 SID-1 independent export pathways.

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Year:  2009        PMID: 19168628      PMCID: PMC2650148          DOI: 10.1073/pnas.0809760106

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  33 in total

1.  Systemic spread of sequence-specific transgene RNA degradation in plants is initiated by localized introduction of ectopic promoterless DNA.

Authors:  O Voinnet; P Vain; S Angell; D C Baulcombe
Journal:  Cell       Date:  1998-10-16       Impact factor: 41.582

2.  Specific interference by ingested dsRNA.

Authors:  L Timmons; A Fire
Journal:  Nature       Date:  1998-10-29       Impact factor: 49.962

3.  Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans.

Authors:  A Fire; S Xu; M K Montgomery; S A Kostas; S E Driver; C C Mello
Journal:  Nature       Date:  1998-02-19       Impact factor: 49.962

4.  Systemic signalling in gene silencing.

Authors:  O Voinnet; D C Baulcombe
Journal:  Nature       Date:  1997-10-09       Impact factor: 49.962

5.  Systemic acquired silencing: transgene-specific post-transcriptional silencing is transmitted by grafting from silenced stocks to non-silenced scions.

Authors:  J C Palauqui; T Elmayan; J M Pollien; H Vaucheret
Journal:  EMBO J       Date:  1997-08-01       Impact factor: 11.598

6.  Functional genomic analysis of RNA interference in C. elegans.

Authors:  John K Kim; Harrison W Gabel; Ravi S Kamath; Muneesh Tewari; Amy Pasquinelli; Jean-François Rual; Scott Kennedy; Michael Dybbs; Nicolas Bertin; Joshua M Kaplan; Marc Vidal; Gary Ruvkun
Journal:  Science       Date:  2005-03-24       Impact factor: 47.728

7.  The endocytic pathway mediates cell entry of dsRNA to induce RNAi silencing.

Authors:  Maria-Carla Saleh; Ronald P van Rij; Armin Hekele; Amethyst Gillis; Edan Foley; Patrick H O'Farrell; Raul Andino
Journal:  Nat Cell Biol       Date:  2006-07-23       Impact factor: 28.824

8.  Transcriptional silencing of a transgene by RNAi in the soma of C. elegans.

Authors:  Alla Grishok; Jina L Sinskey; Phillip A Sharp
Journal:  Genes Dev       Date:  2005-03-01       Impact factor: 11.361

9.  The genetics of Caenorhabditis elegans.

Authors:  S Brenner
Journal:  Genetics       Date:  1974-05       Impact factor: 4.562

10.  Efficient gene transfer in C.elegans: extrachromosomal maintenance and integration of transforming sequences.

Authors:  C C Mello; J M Kramer; D Stinchcomb; V Ambros
Journal:  EMBO J       Date:  1991-12       Impact factor: 11.598

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  54 in total

1.  AGS-3 alters Caenorhabditis elegans behavior after food deprivation via RIC-8 activation of the neural G protein G αo.

Authors:  Catherine Hofler; Michael R Koelle
Journal:  J Neurosci       Date:  2011-08-10       Impact factor: 6.167

Review 2.  Transcellular chaperone signaling: an organismal strategy for integrated cell stress responses.

Authors:  Patricija van Oosten-Hawle; Richard I Morimoto
Journal:  J Exp Biol       Date:  2014-01-01       Impact factor: 3.312

3.  Large-scale gene knockdown in C. elegans using dsRNA feeding libraries to generate robust loss-of-function phenotypes.

Authors:  Kathryn N Maher; Mary Catanese; Daniel L Chase
Journal:  J Vis Exp       Date:  2013-09-25       Impact factor: 1.355

4.  Double-stranded RNA made in C. elegans neurons can enter the germline and cause transgenerational gene silencing.

Authors:  Sindhuja Devanapally; Snusha Ravikumar; Antony M Jose
Journal:  Proc Natl Acad Sci U S A       Date:  2015-02-02       Impact factor: 11.205

Review 5.  Intercellular and systemic movement of RNA silencing signals.

Authors:  Charles W Melnyk; Attila Molnar; David C Baulcombe
Journal:  EMBO J       Date:  2011-08-31       Impact factor: 11.598

6.  The nuclear argonaute NRDE-3 contributes to transitive RNAi in Caenorhabditis elegans.

Authors:  Jimmy J Zhuang; Stephen A Banse; Craig P Hunter
Journal:  Genetics       Date:  2013-03-02       Impact factor: 4.562

Review 7.  RNAi screens to identify components of gene networks that modulate aging in Caenorhabditis elegans.

Authors:  Zhuoyu Ni; Siu Sylvia Lee
Journal:  Brief Funct Genomics       Date:  2010-01-06       Impact factor: 4.241

8.  Uptake of extracellular double-stranded RNA by SID-2.

Authors:  Deborah L McEwan; Alexandra S Weisman; Craig P Hunter
Journal:  Mol Cell       Date:  2012-08-16       Impact factor: 17.970

9.  A novel strategy for cell-autonomous gene knockdown in Caenorhabditis elegans defines a cell-specific function for the G-protein subunit GOA-1.

Authors:  Kathryn N Maher; Aishwarya Swaminathan; Parth Patel; Daniel L Chase
Journal:  Genetics       Date:  2013-03-22       Impact factor: 4.562

10.  Enhanced neuronal RNAi in C. elegans using SID-1.

Authors:  Andrea Calixto; Dattananda Chelur; Irini Topalidou; Xiaoyin Chen; Martin Chalfie
Journal:  Nat Methods       Date:  2010-05-30       Impact factor: 28.547

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