Literature DB >> 19163843

Comparison of spike-sorting algorithms for future hardware implementation.

Sarah Gibson1, Jack W Judy, Dejan Markovic.   

Abstract

Applications such as brain-machine interfaces require hardware spike sorting in order to (1) obtain single-unit activity and (2) perform data reduction for wireless transmission of data. Such systems must be low-power, low-area, high-accuracy, automatic, and able to operate in real time. Several detection and feature extraction algorithms for spike sorting are described briefly and evaluated in terms of accuracy versus computational complexity. The nonlinear energy operator method is chosen as the optimal spike detection algorithm, being most robust over noise and relatively simple. The discrete derivatives method [1] is chosen as the optimal feature extraction method, maintaining high accuracy across SNRs with a complexity orders of magnitude less than that of traditional methods such as PCA.

Mesh:

Year:  2008        PMID: 19163843     DOI: 10.1109/IEMBS.2008.4650340

Source DB:  PubMed          Journal:  Conf Proc IEEE Eng Med Biol Soc        ISSN: 1557-170X


  7 in total

1.  Efficient neural spike sorting using data subdivision and unification.

Authors:  Masood Ul Hassan; Rakesh Veerabhadrappa; Asim Bhatti
Journal:  PLoS One       Date:  2021-02-10       Impact factor: 3.240

2.  A real-time spike classification method based on dynamic time warping for extracellular enteric neural recording with large waveform variability.

Authors:  Yingqiu Cao; Nikolai Rakhilin; Philip H Gordon; Xiling Shen; Edwin C Kan
Journal:  J Neurosci Methods       Date:  2015-12-21       Impact factor: 2.390

3.  Within-subject reaction time variability: Role of cortical networks and underlying neurophysiological mechanisms.

Authors:  Sivylla E Paraskevopoulou; William G Coon; Peter Brunner; Kai J Miller; Gerwin Schalk
Journal:  Neuroimage       Date:  2021-05-04       Impact factor: 6.556

4.  A Simple Method to Simultaneously Detect and Identify Spikes from Raw Extracellular Recordings.

Authors:  Panagiotis C Petrantonakis; Panayiota Poirazi
Journal:  Front Neurosci       Date:  2015-12-02       Impact factor: 4.677

5.  Spike sorting based on shape, phase, and distribution features, and K-TOPS clustering with validity and error indices.

Authors:  Carmen Rocío Caro-Martín; José M Delgado-García; Agnès Gruart; R Sánchez-Campusano
Journal:  Sci Rep       Date:  2018-12-12       Impact factor: 4.379

6.  A brain-machine-muscle interface for restoring hindlimb locomotion after complete spinal transection in rats.

Authors:  Monzurul Alam; Xi Chen; Zicong Zhang; Yan Li; Jufang He
Journal:  PLoS One       Date:  2014-08-01       Impact factor: 3.240

7.  Low-latency single channel real-time neural spike sorting system based on template matching.

Authors:  Pan Ke Wang; Sio Hang Pun; Chang Hao Chen; Elizabeth A McCullagh; Achim Klug; Anan Li; Mang I Vai; Peng Un Mak; Tim C Lei
Journal:  PLoS One       Date:  2019-11-22       Impact factor: 3.240

  7 in total

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