Literature DB >> 19162470

Protein acrobatics in pairs--dimerization via domain swapping.

Angela M Gronenborn1.   

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Year:  2009        PMID： 19162470      PMCID： PMC2676429          DOI： 10.1016/j.sbi.2008.12.002

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN： 0959-440X            Impact factor:   6.809


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  53 in total

1.  The Protein Data Bank.

Authors:  H M Berman; J Westbrook; Z Feng; G Gilliland; T N Bhat; H Weissig; I N Shindyalov; P E Bourne
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  Design of three-dimensional domain-swapped dimers and fibrous oligomers.

Authors:  N L Ogihara; G Ghirlanda; J W Bryson; M Gingery; W F DeGrado; D Eisenberg
Journal:  Proc Natl Acad Sci U S A       Date:  2001-02-13       Impact factor: 11.205

3.  A domain-swapped RNase A dimer with implications for amyloid formation.

Authors:  Y Liu; G Gotte; M Libonati; D Eisenberg
Journal:  Nat Struct Biol       Date:  2001-03

4.  Single-site mutations induce 3D domain swapping in the B1 domain of protein L from Peptostreptococcus magnus.

Authors:  J W O'Neill; D E Kim; K Johnsen; D Baker; K Y Zhang
Journal:  Structure       Date:  2001-11       Impact factor: 5.006

5.  Structures of the two 3D domain-swapped RNase A trimers.

Authors:  Yanshun Liu; Giovanni Gotte; Massimo Libonati; David Eisenberg
Journal:  Protein Sci       Date:  2002-02       Impact factor: 6.725

6.  Crystal structure of the human prion protein reveals a mechanism for oligomerization.

Authors:  K J Knaus; M Morillas; W Swietnicki; M Malone; W K Surewicz; V C Yee
Journal:  Nat Struct Biol       Date:  2001-09

Review 7.  Protein folding and three-dimensional domain swapping: a strained relationship?

Authors:  Marcia E Newcomer
Journal:  Curr Opin Struct Biol       Date:  2002-02       Impact factor: 6.809

8.  Structural properties of trimers and tetramers of ribonuclease A.

Authors:  A Nenci; G Gotte; M Bertoldi; M Libonati
Journal:  Protein Sci       Date:  2001-10       Impact factor: 6.725

9.  Three-dimensional domain swapping in p13suc1 occurs in the unfolded state and is controlled by conserved proline residues.

Authors:  F Rousseau; J W Schymkowitz; H R Wilkinson; L S Itzhaki
Journal:  Proc Natl Acad Sci U S A       Date:  2001-05-08       Impact factor: 11.205

10.  Crystal structure of a stable dimer reveals the molecular basis of serpin polymerization.

Authors:  Masayuki Yamasaki; Wei Li; Daniel J D Johnson; James A Huntington
Journal:  Nature       Date:  2008-10-15       Impact factor: 49.962
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  81 in total

1.  Intra-chain 3D segment swapping spawns the evolution of new multidomain protein architectures.

Authors:  András Szilágyi; Yang Zhang; Péter Závodszky
Journal:  J Mol Biol       Date:  2011-11-04       Impact factor: 5.469

2.  Crystal structure of C5b-6 suggests structural basis for priming assembly of the membrane attack complex.

Authors:  Alexander E Aleshin; Richard G DiScipio; Boguslaw Stec; Robert C Liddington
Journal:  J Biol Chem       Date:  2012-04-12       Impact factor: 5.157

3.  Very few substitutions in a germ line antibody are required to initiate significant domain exchange.

Authors:  Michael Huber; Khoa M Le; Katie J Doores; Zara Fulton; Robyn L Stanfield; Ian A Wilson; Dennis R Burton
Journal:  J Virol       Date:  2010-08-11       Impact factor: 5.103

4.  Metamorphic proteins mediate evolutionary transitions of structure.

Authors:  Itamar Yadid; Noam Kirshenbaum; Michal Sharon; Orly Dym; Dan S Tawfik
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-05       Impact factor: 11.205

5.  Structure of the RuBisCO chaperone RbcX from the thermophilic cyanobacterium Thermosynechococcus elongatus.

Authors:  Miroslaw Tarnawski; Szymon Krzywda; Wojciech Bialek; Mariusz Jaskolski; Andrzej Szczepaniak
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-07-13

6.  Architecture and assembly of HIV integrase multimers in the absence of DNA substrates.

Authors:  Ravi Shankar Bojja; Mark D Andrake; George Merkel; Steven Weigand; Roland L Dunbrack; Anna Marie Skalka
Journal:  J Biol Chem       Date:  2013-01-14       Impact factor: 5.157

7.  Domain-Swapped Dimers of Intracellular Lipid-Binding Proteins: Evidence for Ordered Folding Intermediates.

Authors:  Zahra Assar; Zahra Nossoni; Wenjing Wang; Elizabeth M Santos; Kevin Kramer; Colin McCornack; Chrysoula Vasileiou; Babak Borhan; James H Geiger
Journal:  Structure       Date:  2016-08-11       Impact factor: 5.006

8.  Proline is not uniquely capable of providing the pivot point for domain swapping in 2G12, a broadly neutralizing antibody against HIV-1.

Authors:  Johannes S Gach; Paul G Furtmüller; Heribert Quendler; Paul Messner; Ralf Wagner; Hermann Katinger; Renate Kunert
Journal:  J Biol Chem       Date:  2009-11-10       Impact factor: 5.157

9.  Structural basis of the allosteric inhibitor interaction on the HIV-1 reverse transcriptase RNase H domain.

Authors:  Martin T Christen; Lakshmi Menon; Nataliya S Myshakina; Jinwoo Ahn; Michael A Parniak; Rieko Ishima
Journal:  Chem Biol Drug Des       Date:  2012-08-31       Impact factor: 2.817

10.  Engineered Domain Swapping as an On/Off Switch for Protein Function.

Authors:  Jeung-Hoi Ha; Joshua M Karchin; Nancy Walker-Kopp; Carlos A Castañeda; Stewart N Loh
Journal:  Chem Biol       Date:  2015-10-22
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