Literature DB >> 19162455

Prediction of periventricular leukomalacia. Part I: Selection of hemodynamic features using logistic regression and decision tree algorithms.

Biswanath Samanta1, Geoffrey L Bird, Marijn Kuijpers, Robert A Zimmerman, Gail P Jarvik, Gil Wernovsky, Robert R Clancy, Daniel J Licht, J William Gaynor, Chandrasekhar Nataraj.   

Abstract

OBJECTIVE: Periventricular leukomalacia (PVL) is part of a spectrum of cerebral white matter injury which is associated with adverse neurodevelopmental outcome in preterm infants. While PVL is common in neonates with cardiac disease, both before and after surgery, it is less common in older infants with cardiac disease. Pre-, intra-, and postoperative risk factors for the occurrence of PVL are poorly understood. The main objective of the present work is to identify potential hemodynamic risk factors for PVL occurrence in neonates with complex heart disease using logistic regression analysis and decision tree algorithms.
METHODS: The postoperative hemodynamic and arterial blood gas data (monitoring variables) collected in the cardiac intensive care unit of Children's Hospital of Philadelphia were used for predicting the occurrence of PVL. Three categories of datasets for 103 infants and neonates were used-(1) original data without any preprocessing, (2) partial data keeping the admission, the maximum and the minimum values of the monitoring variables, and (3) extracted dataset of statistical features. The datasets were used as inputs for forward stepwise logistic regression to select the most significant variables as predictors. The selected features were then used as inputs to the decision tree induction algorithm for generating easily interpretable rules for prediction of PVL.
RESULTS: Three sets of data were analyzed in SPSS for identifying statistically significant predictors (p<0.05) of PVL through stepwise logistic regression and their correlations. The classification success of the Case 3 dataset of extracted statistical features was best with sensitivity (SN), specificity (SP) and accuracy (AC) of 87, 88 and 87%, respectively. The identified features, when used with decision tree algorithms, gave SN, SP and AC of 90, 97 and 94% in training and 73, 58 and 65% in test. The identified variables in Case 3 dataset mainly included blood pressure, both systolic and diastolic, partial pressures pO(2) and pCO(2), and their statistical features like average, variance, skewness (a measure of asymmetry) and kurtosis (a measure of abrupt changes). Rules for prediction of PVL were generated automatically through the decision tree algorithms.
CONCLUSIONS: The proposed approach combines the advantages of statistical approach (regression analysis) and data mining techniques (decision tree) for generation of easily interpretable rules for PVL prediction. The present work extends an earlier research [Galli KK, Zimmerman RA, Jarvik GP, Wernovsky G, Kuijpers M, Clancy RR, et al. Periventricular leukomalacia is common after cardiac surgery. J Thorac Cardiovasc Surg 2004;127:692-704] in the form of expanding the feature set, identifying additional prognostic factors (namely pCO(2)) emphasizing the temporal variations in addition to upper or lower values, and generating decision rules. The Case 3 dataset was further investigated in Part II for feature selection through computational intelligence.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19162455      PMCID: PMC2745267          DOI: 10.1016/j.artmed.2008.12.005

Source DB:  PubMed          Journal:  Artif Intell Med        ISSN: 0933-3657            Impact factor:   5.326


  32 in total

1.  Neurologic and developmental disability after extremely preterm birth. EPICure Study Group.

Authors:  N S Wood; N Marlow; K Costeloe; A T Gibson; A R Wilkinson
Journal:  N Engl J Med       Date:  2000-08-10       Impact factor: 91.245

2.  Cerebral white matter injury of the premature infant-more common than you think.

Authors:  Joseph J Volpe
Journal:  Pediatrics       Date:  2003-07       Impact factor: 7.124

3.  Nomographic representation of logistic regression models: a case study using patient self-assessment data.

Authors:  Stephan Dreiseitl; Alexandra Harbauer; Michael Binder; Harald Kittler
Journal:  J Biomed Inform       Date:  2005-03-17       Impact factor: 6.317

Review 4.  Encephalopathy of prematurity includes neuronal abnormalities.

Authors:  Joseph J Volpe
Journal:  Pediatrics       Date:  2005-07       Impact factor: 7.124

5.  Genetically optimized fuzzy decision trees.

Authors:  Witold Pedrycz; Zenon A Sosnowski
Journal:  IEEE Trans Syst Man Cybern B Cybern       Date:  2005-06

6.  Trends in severe brain injury and neurodevelopmental outcome in premature newborn infants: the role of cystic periventricular leukomalacia.

Authors:  Shannon E G Hamrick; Steven P Miller; Carol Leonard; David V Glidden; Ruth Goldstein; Vijay Ramaswamy; Robert Piecuch; Donna M Ferriero
Journal:  J Pediatr       Date:  2004-11       Impact factor: 4.406

7.  Preoperative cerebral blood flow is diminished in neonates with severe congenital heart defects.

Authors:  Daniel J Licht; Jiongjiong Wang; David W Silvestre; Susan C Nicolson; Lisa M Montenegro; Gil Wernovsky; Sarah Tabbutt; Suzanne M Durning; David M Shera; J William Gaynor; Thomas L Spray; Robert R Clancy; Robert A Zimmerman; John A Detre
Journal:  J Thorac Cardiovasc Surg       Date:  2004-12       Impact factor: 5.209

8.  Periventricular leukomalacia is common after neonatal cardiac surgery.

Authors:  Kristin K Galli; Robert A Zimmerman; Gail P Jarvik; Gil Wernovsky; Marijn K Kuypers; Robert R Clancy; Lisa M Montenegro; William T Mahle; Mark F Newman; Ann M Saunders; Susan C Nicolson; Thomas L Spray; J William Gaynor; Kristen K Galli
Journal:  J Thorac Cardiovasc Surg       Date:  2004-03       Impact factor: 5.209

9.  Cancer classification and prediction using logistic regression with Bayesian gene selection.

Authors:  Xiaobo Zhou; Kuang-Yu Liu; Stephen T C Wong
Journal:  J Biomed Inform       Date:  2004-08       Impact factor: 6.317

10.  Statistics review 14: Logistic regression.

Authors:  Viv Bewick; Liz Cheek; Jonathan Ball
Journal:  Crit Care       Date:  2005-01-13       Impact factor: 9.097

View more
  12 in total

1.  Prediction of periventricular leukomalacia occurrence in neonates after heart surgery.

Authors:  Ali Jalali; Erin M Buckley; Jennifer M Lynch; Peter J Schwab; Daniel J Licht; C Nataraj
Journal:  IEEE J Biomed Health Inform       Date:  2013-10-09       Impact factor: 5.772

Review 2.  Neurodevelopmental Outcomes in Children With Congenital Heart Disease-What Can We Impact?

Authors:  Gil Wernovsky; Daniel J Licht
Journal:  Pediatr Crit Care Med       Date:  2016-08       Impact factor: 3.624

3.  Prediction of Periventricular Leukomalacia in Neonates after Cardiac Surgery Using Machine Learning Algorithms.

Authors:  Ali Jalali; Allan F Simpao; Jorge A Gálvez; Daniel J Licht; Chandrasekhar Nataraj
Journal:  J Med Syst       Date:  2018-08-17       Impact factor: 4.460

4.  Application of decision tree in the prediction of periventricular leukomalacia (PVL) occurrence in neonates after heart surgery.

Authors:  Ali Jalali; Daniel J Licht; C Nataraj
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2012

5.  Prediction of periventricular leukomalacia. Part II: Selection of hemodynamic features using computational intelligence.

Authors:  Biswanath Samanta; Geoffrey L Bird; Marijn Kuijpers; Robert A Zimmerman; Gail P Jarvik; Gil Wernovsky; Robert R Clancy; Daniel J Licht; J William Gaynor; Chandrasekhar Nataraj
Journal:  Artif Intell Med       Date:  2009-01-21       Impact factor: 5.326

6.  Disease-free survival after hepatic resection in hepatocellular carcinoma patients: a prediction approach using artificial neural network.

Authors:  Wen-Hsien Ho; King-Teh Lee; Hong-Yaw Chen; Te-Wei Ho; Herng-Chia Chiu
Journal:  PLoS One       Date:  2012-01-03       Impact factor: 3.240

7.  Prevalence and Determinants of Preterm Birth in Tehran, Iran: A Comparison between Logistic Regression and Decision Tree Methods.

Authors:  Payam Amini; Saman Maroufizadeh; Reza Omani Samani; Omid Hamidi; Mahdi Sepidarkish
Journal:  Osong Public Health Res Perspect       Date:  2017-06-30

8.  Clinical parameters predicting failure of empirical antibacterial therapy in early onset neonatal sepsis, identified by classification and regression tree analysis.

Authors:  Tuuli Metsvaht; Heti Pisarev; Mari-Liis Ilmoja; Ulle Parm; Lea Maipuu; Mirjam Merila; Piia Müürsepp; Irja Lutsar
Journal:  BMC Pediatr       Date:  2009-11-24       Impact factor: 2.125

9.  Application of Mathematical Modeling for Simulation and Analysis of Hypoplastic Left Heart Syndrome (HLHS) in Pre- and Postsurgery Conditions.

Authors:  Ali Jalali; Gerard F Jones; Daniel J Licht; C Nataraj
Journal:  Biomed Res Int       Date:  2015-10-25       Impact factor: 3.411

10.  Identification of Potential Type II Diabetes in a Chinese Population with a Sensitive Decision Tree Approach.

Authors:  Dongmei Pei; Chengpu Zhang; Yu Quan; Qiyong Guo
Journal:  J Diabetes Res       Date:  2019-01-22       Impact factor: 4.011

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.