| Literature DB >> 19161591 |
Aiko Miyaishi1, Kayo Osawa, Yasunori Osawa, Natsuko Inoue, Kana Yoshida, Mayumi Kasahara, Akimitsu Tsutou, Yoshiki Tabuchi, Kazuo Sakamoto, Noriaki Tsubota, Juro Takahashi.
Abstract
BACKGROUND: Genetic polymorphisms of DNA repair enzymes in the base excision repair (BER) pathway, may lead to genetic instability and lung cancer carcinogenesis. We investigated the interactions among the gene polymorphisms in DNA repair genes and lung cancer.Entities:
Mesh:
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Year: 2009 PMID: 19161591 PMCID: PMC2656466 DOI: 10.1186/1756-9966-28-10
Source DB: PubMed Journal: J Exp Clin Cancer Res ISSN: 0392-9078
Characteristics of lung cancer case and control subjects
| Patients | Controls | |||||
| Item | n | % | n | % | P-value | |
| Number | 108 | 121 | ||||
| Gender | ||||||
| males | 71 | 65.7 | 74 | 61.2 | 0.491a | |
| females | 37 | 34.3 | 47 | 38.8 | ||
| Age | ||||||
| ~64 | 40 | 37.0 | 50 | 41.3 | ||
| 65~69 | 17 | 15.7 | 29 | 24.0 | ||
| 70~74 | 30 | 27.8 | 20 | 16.5 | ||
| 75~ | 19 | 17.6 | 22 | 18.2 | ||
| unknown | 2 | 1.9 | 0 | 0.0 | ||
| Mean ± S.D. | 65.5 ± 9.4 | 67.4 ± 6.7 | 0.078b | |||
| Smoking status (Pack-years) | ||||||
| Never (Pack-years = 0) | 32 | 29.6 | 55 | 45.5 | ||
| Ever (Pack-years > 0) | 74 | 68.5 | 60 | 49.6 | ||
| unknown | 2 | 1.9 | 6 | 5.0 | ||
| Mean ± S.D. | 33.8 ± 31.7 | 25.6 ± 35.1 | 0.069b | |||
| Histological type | ||||||
| adenocarcinoma | 67 | 62.0 | ||||
| squamous cell carcinoma | 31 | 28.7 | ||||
| others | 10 | 9.3 | ||||
a: χ2 analysis
b: Student's T-test
Genotype distribution in lung cancer and Allele frequency
| Allele frequency | ||||||||||||
| Genotype | patients | controls | crude | adjusted | patients | controls | ||||||
| n | % | n | % | OR (95%CI) | P-value | OR (95%CI)a | P-value | % | % | |||
| Ser/Ser | 27 | 25.0 | 39 | 32.2 | 1.00 | 1.00 | Ser | 0.505 | 0.546 | |||
| Ser/Cys | 55 | 50.9 | 54 | 44.6 | 1.47 (0.79–2.73) | 0.221 | 1.52 (0.80–2.91) | 0.204 | Cys | 0.495 | 0.455 | |
| Cys/Cys | 26 | 24.1 | 28 | 23.1 | 1.34 (0.65–2.77) | 0.427 | 1.47 (0.69–3.12) | 0.313 | ||||
| Gln/Gln | 22 | 20.3 | 37 | 30.6 | 1.00 | 1.00 | Gln | 0.468 | 0.591 | |||
| Gln/His | 57 | 52.8 | 69 | 57.0 | 1.39 (0.74–2.62) | 0.309 | 1.35 (0.70–2.61) | 0.376 | His | 0.532 | 0.409 | |
| His/His | 29 | 26.9 | 15 | 12.4 | 3.25 (1.44–7.36) | 0.005 | 3.03 (1.31–7.00) | 0.010 | ||||
a: OR adjusted for gender, age, smoking habit
Genotype distribution in relation to histological type in lung cancer
| Genotype | Adenocarcinoma | Squamous Cell Carcinoma | ||||||||||||||
| patients | controls | crude | adjusted | patients | controls | crude | adjusted | |||||||||
| n | % | n | % | OR | P-value | OR | P-value | n | % | n | % | OR | P-value | OR | P-value | |
| Ser/Ser | 17 | 25.4 | 39 | 32.2 | 1.00 | 1.00 | 8 | 25.8 | 39 | 32.3 | 1.00 | 1.00 | ||||
| Ser/Cys | 33 | 49.2 | 54 | 44.6 | 1.40 | 0.355 | 1.34 | 0.439 | 16 | 51.6 | 54 | 44.6 | 1.44 | 0.445 | 1.23 | 0.695 |
| Cys/Cys | 17 | 25.4 | 28 | 23.1 | 1.39 | 0.434 | 1.31 | 0.530 | 7 | 22.6 | 28 | 23.1 | 1.22 | 0.730 | 1.54 | 0.491 |
| Gln/Gln | 13 | 19.4 | 37 | 30.6 | 1.00 | 1.00 | 6 | 19.4 | 37 | 30.6 | 1.00 | 1.00 | ||||
| Gln/His | 38 | 56.7 | 69 | 57.0 | 1.57 | 0.237 | 1.55 | 0.263 | 15 | 48.4 | 69 | 57.0 | 1.34 | 0.576 | 1.00 | 0.999 |
| His/His | 16 | 23.9 | 15 | 12.4 | 3.04 | 0.021 | 2.50 | 0.065 | 10 | 32.3 | 15 | 12.4 | 4.11 | 0.019 | 3.20 | 0.075 |
a: OR adjusted for gender, age, smoking habit
Genotype distribution in relation to smoking status in lung cancer
| Non-smokers | Smokers | |||||||||||||||
| Genotype | (Pack-years = 0) | (Pack-years > 0) | ||||||||||||||
| patients | controls | crude | adjusted | patients | controls | crude | adjusted | |||||||||
| n | % | n | % | OR | P-value | OR | P-value | n | % | n | % | OR | P-value | OR
| P-value | |
| OGG1 | ||||||||||||||||
| Ser/Ser | 5 | 15.6 | 14 | 25.5 | 1.00 | 1.00 | 20 | 27.0 | 23 | 38.3 | 1.00 | 1.00 | ||||
| Ser/Cys | 20 | 62.5 | 26 | 47.3 | 2.15 | 0.201 | 2.49 | 0.148 | 35 | 47.3 | 25 | 41.7 | 1.61 | 0.237 | 1.53 | 0.292 |
| Cys/Cys | 7 | 21.9 | 15 | 46.9 | 1.31 | 0.700 | 1.38 | 0.654 | 19 | 25.7 | 12 | 20.0 | 1.82 | 0.211 | 1.81 | 0.219 |
| Gln/Gln | 5 | 15.6 | 18 | 32.7 | 1.00 | 1.00 | 17 | 23.0 | 17 | 28.3 | 1.00 | 1.00 | ||||
| Gln/His | 19 | 59.4 | 28 | 50.9 | 2.44 | 0.128 | 2.06 | 0.233 | 36 | 48.6 | 37 | 61.7 | 0.97 | 0.947 | 1.07 | 0.867 |
| His/His | 8 | 25.0 | 9 | 16.4 | 3.20 | 0.097 | 2.60 | 0.200 | 21 | 28.4 | 6 | 10.0 | 3.50 | 0.030 | 3.82 | 0.022 |
a: OR adjusted for gender, age