Literature DB >> 19154008

The spectra of point mutations in vertebrate genomes.

Guenter Albrecht-Buehler1.   

Abstract

In spite of the importance of point mutations for evolution and human diseases, their natural spectrum of incidence in different species is not known. Here I propose to determine these spectra by comparing consecutive sequence periods in stretches of repetitive DNA. The article presents the analysis of more than 51,000 such point mutations identified by this approach in the genomes of human, chimpanzee, rat, mouse, pufferfish, zebrafish, and sea squirt. I propose to explain the observed spectra by auto-mutagenic mechanisms of genome variation involving the inter-conversions of nucleotides, single base-pair inversions and their combinations.

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Year:  2009        PMID: 19154008     DOI: 10.1002/bies.080081

Source DB:  PubMed          Journal:  Bioessays        ISSN: 0265-9247            Impact factor:   4.345


  7 in total

1.  Rate, molecular spectrum, and consequences of human mutation.

Authors:  Michael Lynch
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-04       Impact factor: 11.205

2.  The mutagenic footprint of low-fidelity Pol I ColE1 plasmid replication in E. coli reveals an extensive interplay between Pol I and Pol III.

Authors:  Christopher Troll; Jordan Yoder; David Alexander; Jaime Hernández; Yueling Loh; Manel Camps
Journal:  Curr Genet       Date:  2013-11-02       Impact factor: 3.886

3.  Roles of DNA polymerase I in leading and lagging-strand replication defined by a high-resolution mutation footprint of ColE1 plasmid replication.

Authors:  Jennifer M Allen; David M Simcha; Nolan G Ericson; David L Alexander; Jacob T Marquette; Benjamin P Van Biber; Chris J Troll; Rachel Karchin; Jason H Bielas; Lawrence A Loeb; Manel Camps
Journal:  Nucleic Acids Res       Date:  2011-05-26       Impact factor: 16.971

4.  Properties and distribution of pure GA-sequences of mammalian genomes.

Authors:  Guenter Albrecht-Buehler
Journal:  PLoS One       Date:  2008-11-27       Impact factor: 3.240

5.  A Tandem Oligonucleotide Approach for SNP-Selective RNA Degradation Using Modified Antisense Oligonucleotides.

Authors:  Dorota Magner; Ewa Biala; Jolanta Lisowiec-Wachnicka; Elzbieta Kierzek; Ryszard Kierzek
Journal:  PLoS One       Date:  2015-11-06       Impact factor: 3.240

6.  The structure of DNA by direct imaging.

Authors:  Monica Marini; Andrea Falqui; Manola Moretti; Tania Limongi; Marco Allione; Alessandro Genovese; Sergei Lopatin; Luca Tirinato; Gobind Das; Bruno Torre; Andrea Giugni; Francesco Gentile; Patrizio Candeloro; Enzo Di Fabrizio
Journal:  Sci Adv       Date:  2015-08-28       Impact factor: 14.136

7.  Influence of mismatched and bulged nucleotides on SNP-preferential RNase H cleavage of RNA-antisense gapmer heteroduplexes.

Authors:  Dorota Magner; Ewa Biala; Jolanta Lisowiec-Wachnicka; Ryszard Kierzek
Journal:  Sci Rep       Date:  2017-10-02       Impact factor: 4.379

  7 in total

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