Literature DB >> 19153082

Crystal Structures of Human MdmX (HdmX) in Complex with p53 Peptide Analogues Reveal Surprising Conformational Changes.

Joerg Kallen1, Arnaud Goepfert, Anke Blechschmidt, Aude Izaac, Martin Geiser, Gisele Tavares, Paul Ramage, Pascal Furet, Keiichi Masuya, Joanna Lisztwan.   

Abstract

p53 tumor suppressor activity is negatively regulated through binding to the oncogenic proteins Hdm2 and HdmX. The p53 residues Leu(26), Trp(23), and Phe(19) are crucial to mediate these interactions. Inhibiting p53 binding to both Hdm2 and HdmX should be a promising clinical approach to reactivate p53 in the cancer setting, but previous studies have suggested that the discovery of dual Hdm2/HdmX inhibitors will be difficult. We have determined the crystal structures at 1.3 A of the N-terminal domain of HdmX bound to two p53 peptidomimetics without and with a 6-chlorine substituent on the indole (which binds in the same subpocket as Trp(23) of p53). The latter compound is the most potent peptide-based antagonist of the p53-Hdm2 interaction yet to be described. The x-ray structures revealed surprising conformational changes of the binding cleft of HdmX, including an "open conformation" of Tyr(99) and unexpected "cross-talk" between the Trp and Leu pockets. Notably, the 6-chloro p53 peptidomimetic bound with high affinity to both HdmX and Hdm2 (K(d) values of 36 and 7 nm, respectively). Our results suggest that the development of potent dual inhibitors for HdmX and Hdm2 should be feasible. They also reveal possible conformational states of HdmX, which should lead to a better prediction of its interactions with potential biological partners.

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Year:  2009        PMID: 19153082      PMCID: PMC2659239          DOI: 10.1074/jbc.M809096200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  35 in total

1.  mdmx is a negative regulator of p53 activity in vivo.

Authors:  Rick A Finch; Dorit B Donoviel; David Potter; Min Shi; Amy Fan; Deon D Freed; Ching-Yun Wang; Brian P Zambrowicz; Ramiro Ramirez-Solis; Arthur T Sands; Nan Zhang
Journal:  Cancer Res       Date:  2002-06-01       Impact factor: 12.701

2.  Discovery of potent antagonists of the interaction between human double minute 2 and tumor suppressor p53.

Authors:  C García-Echeverría; P Chène; M J Blommers; P Furet
Journal:  J Med Chem       Date:  2000-08-24       Impact factor: 7.446

3.  Protein structure and enzyme action.

Authors:  D E KOSHLAND; W J RAY; M J ERWIN
Journal:  Fed Proc       Date:  1958-12

4.  Refinement of macromolecular structures by the maximum-likelihood method.

Authors:  G N Murshudov; A A Vagin; E J Dodson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1997-05-01

5.  The CCP4 suite: programs for protein crystallography.

Authors: 
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1994-09-01

6.  Coot: model-building tools for molecular graphics.

Authors:  Paul Emsley; Kevin Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2004-11-26

7.  Discovery and cocrystal structure of benzodiazepinedione HDM2 antagonists that activate p53 in cells.

Authors:  Bruce L Grasberger; Tianbao Lu; Carsten Schubert; Daniel J Parks; Theodore E Carver; Holly K Koblish; Maxwell D Cummings; Louis V LaFrance; Karen L Milkiewicz; Raul R Calvo; Diane Maguire; Jennifer Lattanze; Carol F Franks; Shuyuan Zhao; Kannan Ramachandren; Gwendolyn R Bylebyl; Marie Zhang; Carl L Manthey; Eugene C Petrella; Michael W Pantoliano; Ingrid C Deckman; John C Spurlino; Anna C Maroney; Bruce E Tomczuk; Christopher J Molloy; Roger F Bone
Journal:  J Med Chem       Date:  2005-02-24       Impact factor: 7.446

8.  Rescue of embryonic lethality in Mdm4-null mice by loss of Trp53 suggests a nonoverlapping pathway with MDM2 to regulate p53.

Authors:  J Parant; A Chavez-Reyes; N A Little; W Yan; V Reinke; A G Jochemsen; G Lozano
Journal:  Nat Genet       Date:  2001-09       Impact factor: 38.330

9.  Mdm4 (Mdmx) regulates p53-induced growth arrest and neuronal cell death during early embryonic mouse development.

Authors:  Domenico Migliorini; Eros Lazzerini Denchi; Davide Danovi; Aart Jochemsen; Manuela Capillo; Alberto Gobbi; Kristian Helin; Pier Giuseppe Pelicci; Jean-Christophe Marine
Journal:  Mol Cell Biol       Date:  2002-08       Impact factor: 4.272

10.  In vivo activation of the p53 pathway by small-molecule antagonists of MDM2.

Authors:  Lyubomir T Vassilev; Binh T Vu; Bradford Graves; Daisy Carvajal; Frank Podlaski; Zoran Filipovic; Norman Kong; Ursula Kammlott; Christine Lukacs; Christian Klein; Nader Fotouhi; Emily A Liu
Journal:  Science       Date:  2004-01-02       Impact factor: 47.728

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  28 in total

1.  Synthesis of cell-permeable stapled peptide dual inhibitors of the p53-Mdm2/Mdmx interactions via photoinduced cycloaddition.

Authors:  Michael M Madden; Avinash Muppidi; Zhenyu Li; Xiaolong Li; Jiandong Chen; Qing Lin
Journal:  Bioorg Med Chem Lett       Date:  2011-01-07       Impact factor: 2.823

2.  A stapled p53 helix overcomes HDMX-mediated suppression of p53.

Authors:  Federico Bernal; Mark Wade; Marina Godes; Tina N Davis; David G Whitehead; Andrew L Kung; Geoffrey M Wahl; Loren D Walensky
Journal:  Cancer Cell       Date:  2010-11-16       Impact factor: 31.743

3.  Identification of a Structural Determinant for Selective Targeting of HDMX.

Authors:  Yael Ben-Nun; Hyuk-Soo Seo; Edward P Harvey; Zachary J Hauseman; Thomas E Wales; Catherine E Newman; Ann M Cathcart; John R Engen; Sirano Dhe-Paganon; Loren D Walensky
Journal:  Structure       Date:  2020-04-30       Impact factor: 5.006

4.  Casein kinase 1α regulates an MDMX intramolecular interaction to stimulate p53 binding.

Authors:  Shaofang Wu; Lihong Chen; Andreas Becker; Ernst Schonbrunn; Jiandong Chen
Journal:  Mol Cell Biol       Date:  2012-10-01       Impact factor: 4.272

5.  Competitive binding between dynamic p53 transactivation subdomains to human MDM2 protein: implications for regulating the p53·MDM2/MDMX interaction.

Authors:  Bing Shan; Da-Wei Li; Lei Brüschweiler-Li; Rafael Brüschweiler
Journal:  J Biol Chem       Date:  2012-07-17       Impact factor: 5.157

6.  Lithocholic acid is an endogenous inhibitor of MDM4 and MDM2.

Authors:  Simon M Vogel; Matthias R Bauer; Andreas C Joerger; Rainer Wilcken; Tobias Brandt; Dmitry B Veprintsev; Trevor J Rutherford; Alan R Fersht; Frank M Boeckler
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-03       Impact factor: 11.205

7.  Identification and characterization of the first small molecule inhibitor of MDMX.

Authors:  Damon Reed; Ying Shen; Anang A Shelat; Leggy A Arnold; Antonio M Ferreira; Fangyi Zhu; Nicholas Mills; David C Smithson; Catherine A Regni; Donald Bashford; Samantha A Cicero; Brenda A Schulman; Aart G Jochemsen; R Kiplin Guy; Michael A Dyer
Journal:  J Biol Chem       Date:  2010-01-15       Impact factor: 5.157

8.  N-acylpolyamine inhibitors of HDM2 and HDMX binding to p53.

Authors:  Ryo Hayashi; Deyun Wang; Toshiaki Hara; Jaclyn A Iera; Stewart R Durell; Daniel H Appella
Journal:  Bioorg Med Chem       Date:  2009-10-21       Impact factor: 3.641

Review 9.  Targeting the ubiquitin-mediated proteasome degradation of p53 for cancer therapy.

Authors:  Tiffany Devine; Mu-Shui Dai
Journal:  Curr Pharm Des       Date:  2013       Impact factor: 3.116

10.  Activation of the p53 pathway by small-molecule-induced MDM2 and MDMX dimerization.

Authors:  Bradford Graves; Thelma Thompson; Mingxuan Xia; Cheryl Janson; Christine Lukacs; Dayanand Deo; Paola Di Lello; David Fry; Colin Garvie; Kuo-Sen Huang; Lin Gao; Christian Tovar; Allen Lovey; Jutta Wanner; Lyubomir T Vassilev
Journal:  Proc Natl Acad Sci U S A       Date:  2012-06-28       Impact factor: 11.205

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