Literature DB >> 19130905

Structures of AcrR and CmeR: insight into the mechanisms of transcriptional repression and multi-drug recognition in the TetR family of regulators.

Mathew D Routh1, Chih-Chia Su, Qijing Zhang, Edward W Yu.   

Abstract

The transcriptional regulators of the TetR family act as chemical sensors to monitor the cellular environment in many bacterial species. To perform this function, members of the TetR family harbor a diverse ligand-binding domain capable of recognizing the same series of compounds as the transporters they regulate. Many of the regulators can be induced by a wide array of structurally unrelated compounds. Binding of these structurally unrelated ligands to the regulator results in a conformational change that is transmitted to the DNA-binding region, causing the repressor to lose its DNA-binding capacity and allowing for the initiation of transcription. The multi-drug binding proteins AcrR of Escherichia coli and CmeR from Campylobacter jejuni are members of the TetR family of transcriptional repressors that regulate the expression of the multidrug resistant efflux pumps AcrAB and CmeABC, respectively. To gain insights into the mechanisms of transcriptional regulation and how multiple ligands induce the same physiological response, we determined the crystal structures of the AcrR and CmeR regulatory proteins. In this review, we will summarize the new findings with AcrR and CmeR, and discuss the novel features of these two proteins in comparison with other regulators in the TetR family.

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Year:  2008        PMID: 19130905      PMCID: PMC2729549          DOI: 10.1016/j.bbapap.2008.12.001

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  55 in total

1.  Structural basis of gene regulation by the tetracycline inducible Tet repressor-operator system.

Authors:  P Orth; D Schnappinger; W Hillen; W Saenger; W Hinrichs
Journal:  Nat Struct Biol       Date:  2000-03

Review 2.  The RND permease superfamily: an ancient, ubiquitous and diverse family that includes human disease and development proteins.

Authors:  T T Tseng; K S Gratwick; J Kollman; D Park; D H Nies; A Goffeau; M H Saier
Journal:  J Mol Microbiol Biotechnol       Date:  1999-08

3.  Cross-linked complex between oligomeric periplasmic lipoprotein AcrA and the inner-membrane-associated multidrug efflux pump AcrB from Escherichia coli.

Authors:  H I Zgurskaya; H Nikaido
Journal:  J Bacteriol       Date:  2000-08       Impact factor: 3.490

4.  Crystal structure of the bacterial membrane protein TolC central to multidrug efflux and protein export.

Authors:  V Koronakis; A Sharff; E Koronakis; B Luisi; C Hughes
Journal:  Nature       Date:  2000-06-22       Impact factor: 49.962

Review 5.  Antibiotic resistance: consequences of inaction.

Authors:  S B Levy
Journal:  Clin Infect Dis       Date:  2001-09-15       Impact factor: 9.079

Review 6.  The TetR family of transcriptional repressors.

Authors:  Juan L Ramos; Manuel Martínez-Bueno; Antonio J Molina-Henares; Wilson Terán; Kazuya Watanabe; Xiaodong Zhang; María Trinidad Gallegos; Richard Brennan; Raquel Tobes
Journal:  Microbiol Mol Biol Rev       Date:  2005-06       Impact factor: 11.056

7.  CmeR functions as a transcriptional repressor for the multidrug efflux pump CmeABC in Campylobacter jejuni.

Authors:  Jun Lin; Masato Akiba; Orhan Sahin; Qijing Zhang
Journal:  Antimicrob Agents Chemother       Date:  2005-03       Impact factor: 5.191

8.  The genome sequence of the food-borne pathogen Campylobacter jejuni reveals hypervariable sequences.

Authors:  J Parkhill; B W Wren; K Mungall; J M Ketley; C Churcher; D Basham; T Chillingworth; R M Davies; T Feltwell; S Holroyd; K Jagels; A V Karlyshev; S Moule; M J Pallen; C W Penn; M A Quail; M A Rajandream; K M Rutherford; A H van Vliet; S Whitehead; B G Barrell
Journal:  Nature       Date:  2000-02-10       Impact factor: 49.962

9.  Crystal structure of the transcription activator BmrR bound to DNA and a drug.

Authors:  E E Heldwein; R G Brennan
Journal:  Nature       Date:  2001-01-18       Impact factor: 49.962

10.  The multidrug efflux regulator TtgV recognizes a wide range of structurally different effectors in solution and complexed with target DNA: evidence from isothermal titration calorimetry.

Authors:  María-Eugenia Guazzaroni; Tino Krell; Antonia Felipe; Raquel Ruiz; Cuixiang Meng; Xiaodong Zhang; María-Trinidad Gallegos; Juan L Ramos
Journal:  J Biol Chem       Date:  2005-03-13       Impact factor: 5.157

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  20 in total

1.  Functional genomics of Lactobacillus casei establishment in the gut.

Authors:  Hélène Licandro-Seraut; Hélène Scornec; Thierry Pédron; Jean-François Cavin; Philippe J Sansonetti
Journal:  Proc Natl Acad Sci U S A       Date:  2014-07-14       Impact factor: 11.205

2.  Regulation of RamA by RamR in Salmonella enterica serovar Typhimurium: isolation of a RamR superrepressor.

Authors:  Vito Ricci; Stephen J W Busby; Laura J V Piddock
Journal:  Antimicrob Agents Chemother       Date:  2012-09-04       Impact factor: 5.191

3.  Mutational and transcriptomic changes involved in the development of macrolide resistance in Campylobacter jejuni.

Authors:  Haihong Hao; Zonghui Yuan; Zhangqi Shen; Jing Han; Orhan Sahin; Peng Liu; Qijing Zhang
Journal:  Antimicrob Agents Chemother       Date:  2012-12-28       Impact factor: 5.191

4.  Binding of the RamR repressor to wild-type and mutated promoters of the RamA gene involved in efflux-mediated multidrug resistance in Salmonella enterica serovar Typhimurium.

Authors:  Sylvie Baucheron; Franck Coste; Sylvie Canepa; Marie-Christine Maurel; Etienne Giraud; Françoise Culard; Bertrand Castaing; Alain Roussel; Axel Cloeckaert
Journal:  Antimicrob Agents Chemother       Date:  2011-11-28       Impact factor: 5.191

5.  Discovery of intracellular heme-binding protein HrtR, which controls heme efflux by the conserved HrtB-HrtA transporter in Lactococcus lactis.

Authors:  Delphine Lechardeur; Bénédicte Cesselin; Ursula Liebl; Marten H Vos; Annabelle Fernandez; Célia Brun; Alexandra Gruss; Philippe Gaudu
Journal:  J Biol Chem       Date:  2011-11-14       Impact factor: 5.157

Review 6.  Efflux pumps of the resistance-nodulation-division family: a perspective of their structure, function, and regulation in gram-negative bacteria.

Authors:  Mathew D Routh; Yaramah Zalucki; Chih-Chia Su; Qijing Zhang; William M Shafer; Edward W Yu
Journal:  Adv Enzymol Relat Areas Mol Biol       Date:  2011

7.  Crystal structures of CmeR-bile acid complexes from Campylobacter jejuni.

Authors:  Hsiang-Ting Lei; Zhangqi Shen; Priyanka Surana; Mathew D Routh; Chih-Chia Su; Qijing Zhang; Edward W Yu
Journal:  Protein Sci       Date:  2011-04       Impact factor: 6.725

8.  Epoxide-mediated CifR repression of cif gene expression utilizes two binding sites in Pseudomonas aeruginosa.

Authors:  Alicia E Ballok; Christopher D Bahl; Emily L Dolben; Allia K Lindsay; Jessica D St Laurent; Deborah A Hogan; Dean R Madden; George A O'Toole
Journal:  J Bacteriol       Date:  2012-07-27       Impact factor: 3.490

9.  Loop-to-helix transition in the structure of multidrug regulator AcrR at the entrance of the drug-binding cavity.

Authors:  Babu A Manjasetty; Andrei S Halavaty; Chi-Hao Luan; Jerzy Osipiuk; Rory Mulligan; Keehwan Kwon; Wayne F Anderson; Andrzej Joachimiak
Journal:  J Struct Biol       Date:  2016-01-18       Impact factor: 2.867

10.  A Split Transcriptional Repressor That Links Protein Solubility to an Orthogonal Genetic Circuit.

Authors:  Yimeng Zeng; Alicia M Jones; Emily E Thomas; Barbara Nassif; Jonathan J Silberg; Laura Segatori
Journal:  ACS Synth Biol       Date:  2018-08-23       Impact factor: 5.110

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