Literature DB >> 19125639

Therapeutic potential of splice-switching oligonucleotides.

John Bauman1, Natee Jearawiriyapaisarn, Ryszard Kole.   

Abstract

Alternative splicing enables a single pre-messenger RNA transcript to yield multiple protein isoforms, making it a major contributor to the diversity of the proteome. While this process is essential for normal development, aberrations in alternative splicing are the cause of a multitude of human diseases. Methods for manipulating alternative splicing would thus be of therapeutic value. Chemically modified antisense oligonucleotides that alter alternative splicing by directing splice site selection have been developed to achieve this end. These splice-switching oligonucleotides (SSOs) have been applied to correct aberrant splicing, induce expression of a therapeutic splice variant, or induce expression of a novel therapeutic splice variant in a number of disease-relevant genes. Recently, in vivo efficacy of SSOs has been reported using animal disease models, as well as in results from the first clinical trial.

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Year:  2009        PMID: 19125639      PMCID: PMC2663420          DOI: 10.1089/oli.2008.0161

Source DB:  PubMed          Journal:  Oligonucleotides        ISSN: 1545-4576


  99 in total

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Authors:  Annemieke Aartsma-Rus; Wendy E Kaman; Rudie Weij; Johan T den Dunnen; Gert-Jan B van Ommen; Judith C T van Deutekom
Journal:  Mol Ther       Date:  2006-06-06       Impact factor: 11.454

2.  Intravenous infusion of an antisense oligonucleotide results in exon skipping in muscle dystrophin mRNA of Duchenne muscular dystrophy.

Authors:  Yasuhiro Takeshima; Mariko Yagi; Hiroko Wada; Kazuto Ishibashi; Atsushi Nishiyama; Mikio Kakumoto; Toshiyuki Sakaeda; Ryuichi Saura; Katsuhiko Okumura; Masafumi Matsuo
Journal:  Pediatr Res       Date:  2006-05       Impact factor: 3.756

3.  Aberrant splicing in MLH1 and MSH2 due to exonic and intronic variants.

Authors:  Constanze Pagenstecher; Maria Wehner; Waltraut Friedl; Nils Rahner; Stefan Aretz; Nicolaus Friedrichs; Marlies Sengteller; Wolfram Henn; Reinhard Buettner; Peter Propping; Elisabeth Mangold
Journal:  Hum Genet       Date:  2005-12-08       Impact factor: 4.132

4.  Atp7a determines a hierarchy of copper metabolism essential for notochord development.

Authors:  Bryce A Mendelsohn; Chunyue Yin; Stephen L Johnson; Thomas P Wilm; Lilianna Solnica-Krezel; Jonathan D Gitlin
Journal:  Cell Metab       Date:  2006-08       Impact factor: 27.287

5.  Multiexon skipping leading to an artificial DMD protein lacking amino acids from exons 45 through 55 could rescue up to 63% of patients with Duchenne muscular dystrophy.

Authors:  Christophe Béroud; Sylvie Tuffery-Giraud; Masafumi Matsuo; Dalil Hamroun; Véronique Humbertclaude; Nicole Monnier; Marie-Pierre Moizard; Marie-Antoinette Voelckel; Laurence Michel Calemard; Pierre Boisseau; Martine Blayau; Christophe Philippe; Mireille Cossée; Michel Pagès; François Rivier; Olivier Danos; Luis Garcia; Mireille Claustres
Journal:  Hum Mutat       Date:  2007-02       Impact factor: 4.878

6.  RNAi-mediated gene silencing in non-human primates.

Authors:  Tracy S Zimmermann; Amy C H Lee; Akin Akinc; Birgit Bramlage; David Bumcrot; Matthew N Fedoruk; Jens Harborth; James A Heyes; Lloyd B Jeffs; Matthias John; Adam D Judge; Kieu Lam; Kevin McClintock; Lubomir V Nechev; Lorne R Palmer; Timothy Racie; Ingo Röhl; Stephan Seiffert; Sumi Shanmugam; Vandana Sood; Jürgen Soutschek; Ivanka Toudjarska; Amanda J Wheat; Ed Yaworski; William Zedalis; Victor Koteliansky; Muthiah Manoharan; Hans-Peter Vornlocher; Ian MacLachlan
Journal:  Nature       Date:  2006-03-26       Impact factor: 49.962

7.  Efficient and persistent splice switching by systemically delivered LNA oligonucleotides in mice.

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Journal:  Mol Ther       Date:  2006-07-18       Impact factor: 11.454

8.  Systemic delivery of morpholino oligonucleotide restores dystrophin expression bodywide and improves dystrophic pathology.

Authors:  Julia Alter; Fang Lou; Adam Rabinowitz; HaiFang Yin; Jeffrey Rosenfeld; Steve D Wilton; Terence A Partridge; Qi Long Lu
Journal:  Nat Med       Date:  2006-01-29       Impact factor: 53.440

9.  Modification of MyD88 mRNA splicing and inhibition of IL-1beta signaling in cell culture and in mice with a 2'-O-methoxyethyl-modified oligonucleotide.

Authors:  Timothy A Vickers; Hong Zhang; Mark J Graham; Kristina M Lemonidis; Chenguang Zhao; Nicholas M Dean
Journal:  J Immunol       Date:  2006-03-15       Impact factor: 5.422

10.  Antisense oligonucleotide-induced alternative splicing of the APOB mRNA generates a novel isoform of APOB.

Authors:  Bernard Khoo; Xavier Roca; Shern L Chew; Adrian R Krainer
Journal:  BMC Mol Biol       Date:  2007-01-17       Impact factor: 2.946

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  54 in total

1.  Modulation of RNA splicing as a potential treatment for cancer.

Authors:  John A Bauman; Ryszard Kole
Journal:  Bioeng Bugs       Date:  2011-05-01

Review 2.  Argonaute and the nuclear RNAs: new pathways for RNA-mediated control of gene expression.

Authors:  Keith T Gagnon; David R Corey
Journal:  Nucleic Acid Ther       Date:  2012-01-27       Impact factor: 5.486

3.  An antisense microwalk reveals critical role of an intronic position linked to a unique long-distance interaction in pre-mRNA splicing.

Authors:  Natalia N Singh; Katrin Hollinger; Dhruva Bhattacharya; Ravindra N Singh
Journal:  RNA       Date:  2010-04-22       Impact factor: 4.942

Review 4.  Type 1 diabetes in mice and men: gene expression profiling to investigate disease pathogenesis.

Authors:  Linda Yip; C Garrison Fathman
Journal:  Immunol Res       Date:  2014-05       Impact factor: 2.829

5.  Antitumorigenic potential of STAT3 alternative splicing modulation.

Authors:  Francesca Zammarchi; Elisa de Stanchina; Eirini Bournazou; Teerawit Supakorndej; Kathryn Martires; Elyn Riedel; Adriana D Corben; Jacqueline F Bromberg; Luca Cartegni
Journal:  Proc Natl Acad Sci U S A       Date:  2011-10-17       Impact factor: 11.205

Review 6.  Silencing disease genes in the laboratory and the clinic.

Authors:  Jonathan K Watts; David R Corey
Journal:  J Pathol       Date:  2011-11-09       Impact factor: 7.996

Review 7.  Aberrant RNA splicing in cancer; expression changes and driver mutations of splicing factor genes.

Authors:  A Sveen; S Kilpinen; A Ruusulehto; R A Lothe; R I Skotheim
Journal:  Oncogene       Date:  2015-08-24       Impact factor: 9.867

Review 8.  Self-antigen expression in the peripheral immune system: roles in self-tolerance and type 1 diabetes pathogenesis.

Authors:  Rebecca Fuhlbrigge; Linda Yip
Journal:  Curr Diab Rep       Date:  2014       Impact factor: 4.810

9.  A high-throughput screening assay for the functional delivery of splice-switching oligonucleotides in human melanoma cells.

Authors:  John M Dean; Robert K DeLong
Journal:  Methods Mol Biol       Date:  2015

10.  Human slow troponin T (TNNT1) pre-mRNA alternative splicing is an indicator of skeletal muscle response to resistance exercise in older adults.

Authors:  Tan Zhang; Seung Jun Choi; Zhong-Min Wang; Alexander Birbrair; María L Messi; Jian-Ping Jin; Anthony P Marsh; Barbara Nicklas; Osvaldo Delbono
Journal:  J Gerontol A Biol Sci Med Sci       Date:  2013-12-24       Impact factor: 6.053

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