Literature DB >> 19124587

O2 and reactive oxygen species detoxification complex, composed of O2-responsive NADH:rubredoxin oxidoreductase-flavoprotein A2-desulfoferrodoxin operon enzymes, rubperoxin, and rubredoxin, in Clostridium acetobutylicum.

Shinji Kawasaki1, Yu Sakai, Tohru Takahashi, Ippei Suzuki, Youichi Niimura.   

Abstract

Clostridium acetobutylicum, an obligate anaerobe, grows normally under continuous-O(2)-flow culture conditions, where the cells consume O(2) proficiently. An O(2)-responsive NADH:rubredoxin oxidoreductase operon composed of three genes (nror, fprA2, and dsr), encoding NROR, functionally uncharacterized flavoprotein A2 (FprA2), and the predicted superoxide reductase desulfoferrodoxin (Dsr), has been proposed to participate in defense against O(2) stress. To functionally characterize these proteins, native NROR from C. acetobutylicum, recombinant NROR (rNROR), FprA2, Dsr, and rubredoxin (Rd) expressed in Escherichia coli were purified. Purified native NROR and rNROR both exhibited weak H(2)O(2)-forming NADH oxidase activity that was slightly activated by Rd. A mixture of NROR, Rd, and FprA2 functions as an efficient H(2)O-forming NADH oxidase with a high affinity for O(2) (the K(m) for O(2) is 2.9 +/- 0.4 microM). A mixture of NROR, Rd, and Dsr functions as an NADH-dependent O(2)(-) reductase. A mixture of NROR, Rd, and rubperoxin (Rpr, a rubrerythrin homologue) functions as an inefficient H(2)O-forming NADH oxidase but an efficient NADH peroxidase with a low affinity for O(2) and a high affinity for H(2)O(2) (the K(m)s for O(2) and H(2)O(2) are 303 +/- 39 microM and <or=1 microM, respectively). A gene encoding Rd is dicistronically transcribed with a gene encoding a glutaredoxin (Gd) homologue, and the expression levels of the genes encoding Gd and Rd were highly upregulated upon exposure to O(2). Therefore, nror operon enzymes, together with Rpr, efficiently function to scavenge O(2), O(2)(-), and H(2)O(2) by using an O(2)-responsive rubredoxin as a common electron carrier protein.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19124587      PMCID: PMC2643570          DOI: 10.1128/AEM.01425-08

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  33 in total

1.  Docking and electron transfer studies between rubredoxin and rubredoxin:oxygen oxidoreductase.

Authors:  Bruno L Victor; João B Vicente; Rute Rodrigues; Solange Oliveira; Claudina Rodrigues-Pousada; Carlos Frazão; Cláudio M Gomes; Miguel Teixeira; Cláudio M Soares
Journal:  J Biol Inorg Chem       Date:  2003-02-15       Impact factor: 3.358

2.  Neelaredoxin, an iron-binding protein from the syphilis spirochete, Treponema pallidum, is a superoxide reductase.

Authors:  T Jovanović; C Ascenso; K R Hazlett; R Sikkink; C Krebs; R Litwiller; L M Benson; I Moura; J J Moura; J D Radolf; B H Huynh; S Naylor; F Rusnak
Journal:  J Biol Chem       Date:  2000-09-15       Impact factor: 5.157

3.  Five-gene cluster in Clostridium thermoaceticum consisting of two divergent operons encoding rubredoxin oxidoreductase- rubredoxin and rubrerythrin-type A flavoprotein- high-molecular-weight rubredoxin.

Authors:  A Das; E D Coulter; D M Kurtz; L G Ljungdahl
Journal:  J Bacteriol       Date:  2001-03       Impact factor: 3.490

4.  A flavodiiron protein and high molecular weight rubredoxin from Moorella thermoacetica with nitric oxide reductase activity.

Authors:  Radu Silaghi-Dumitrescu; Eric D Coulter; Amaresh Das; Lars G Ljungdahl; Guy N L Jameson; Boi Hanh Huynh; Donald M Kurtz
Journal:  Biochemistry       Date:  2003-03-18       Impact factor: 3.162

5.  Rubredoxin: a new electron transfer protein from Clostridium pasteurianum.

Authors:  W Lovenberg; B E Sobel
Journal:  Proc Natl Acad Sci U S A       Date:  1965-07       Impact factor: 11.205

6.  Genome sequence and comparative analysis of the solvent-producing bacterium Clostridium acetobutylicum.

Authors:  J Nölling; G Breton; M V Omelchenko; K S Makarova; Q Zeng; R Gibson; H M Lee; J Dubois; D Qiu; J Hitti; Y I Wolf; R L Tatusov; F Sabathe; L Doucette-Stamm; P Soucaille; M J Daly; G N Bennett; E V Koonin; D R Smith
Journal:  J Bacteriol       Date:  2001-08       Impact factor: 3.490

7.  A rubrerythrin-like oxidative stress protein of Clostridium acetobutylicum is encoded by a duplicated gene and identical to the heat shock protein Hsp21.

Authors:  Antje May; Falk Hillmann; Oliver Riebe; Ralf-Jörg Fischer; Hubert Bahl
Journal:  FEMS Microbiol Lett       Date:  2004-09-01       Impact factor: 2.742

8.  F420H2 oxidase (FprA) from Methanobrevibacter arboriphilus, a coenzyme F420-dependent enzyme involved in O2 detoxification.

Authors:  Henning Seedorf; Annette Dreisbach; Reiner Hedderich; Seigo Shima; Rudolf K Thauer
Journal:  Arch Microbiol       Date:  2004-08-31       Impact factor: 2.552

9.  Identification of O2-induced peptides in an obligatory anaerobe, Clostridium acetobutylicum.

Authors:  Shinji Kawasaki; Jun Ishikura; Yusuke Watamura; Youichi Niimura
Journal:  FEBS Lett       Date:  2004-07-30       Impact factor: 4.124

10.  Purification and characterization of an H2O-forming NADH oxidase from Clostridium aminovalericum: existence of an oxygen-detoxifying enzyme in an obligate anaerobic bacteria.

Authors:  Shinji Kawasaki; Jun Ishikura; Daisuke Chiba; Tomoko Nishino; Youichi Niimura
Journal:  Arch Microbiol       Date:  2004-03-11       Impact factor: 2.552

View more
  19 in total

1.  Insights into the mode of action of benzyl isothiocyanate on Campylobacter jejuni.

Authors:  Virginie Dufour; Martin Stahl; Eric Rosenfeld; Alain Stintzi; Christine Baysse
Journal:  Appl Environ Microbiol       Date:  2013-09-06       Impact factor: 4.792

2.  Metabolic response of Clostridium ljungdahlii to oxygen exposure.

Authors:  Jason M Whitham; Oscar Tirado-Acevedo; Mari S Chinn; Joel J Pawlak; Amy M Grunden
Journal:  Appl Environ Microbiol       Date:  2015-10-02       Impact factor: 4.792

3.  Redox-responsive repressor Rex modulates alcohol production and oxidative stress tolerance in Clostridium acetobutylicum.

Authors:  Lei Zhang; Xiaoqun Nie; Dmitry A Ravcheev; Dmitry A Rodionov; Jia Sheng; Yang Gu; Sheng Yang; Weihong Jiang; Chen Yang
Journal:  J Bacteriol       Date:  2014-09-02       Impact factor: 3.490

4.  Crystallization and preliminary X-ray analysis of NADH:rubredoxin oxidoreductase from Clostridium acetobutylicum.

Authors:  Koji Nishikawa; Yasuhito Shomura; Shinji Kawasaki; Youichi Niimura; Yoshiki Higuchi
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2009-12-25

5.  Rubredoxin from the green sulfur bacterium Chlorobaculum tepidum donates a redox equivalent to the flavodiiron protein in an NAD(P)H dependent manner via ferredoxin-NAD(P)+ oxidoreductase.

Authors:  Wanwipa Ittarat; Takeshi Sato; Masaharu Kitashima; Hidehiro Sakurai; Kazuhito Inoue; Daisuke Seo
Journal:  Arch Microbiol       Date:  2020-10-14       Impact factor: 2.552

6.  An anaerobic bacterium, Bacteroides thetaiotaomicron, uses a consortium of enzymes to scavenge hydrogen peroxide.

Authors:  Surabhi Mishra; James A Imlay
Journal:  Mol Microbiol       Date:  2013-11-20       Impact factor: 3.501

7.  Global regulation of gene expression in response to cysteine availability in Clostridium perfringens.

Authors:  Gaelle André; Elise Haudecoeur; Marc Monot; Kaori Ohtani; Tohru Shimizu; Bruno Dupuy; Isabelle Martin-Verstraete
Journal:  BMC Microbiol       Date:  2010-09-07       Impact factor: 3.605

8.  Complete genome sequence of Desulfohalobium retbaense type strain (HR(100)).

Authors:  Stefan Spring; Matt Nolan; Alla Lapidus; Tijana Glavina Del Rio; Alex Copeland; Hope Tice; Jan-Fang Cheng; Susan Lucas; Miriam Land; Feng Chen; David Bruce; Lynne Goodwin; Sam Pitluck; Natalia Ivanova; Konstantinos Mavromatis; Natalia Mikhailova; Amrita Pati; Amy Chen; Krishna Palaniappan; Loren Hauser; Yun-Juan Chang; Cynthia D Jeffries; Christine Munk; Hajnalka Kiss; Patrick Chain; Cliff Han; Thomas Brettin; John C Detter; Esther Schüler; Markus Göker; Manfred Rohde; Jim Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Nikos C Kyrpides; Hans-Peter Klenk
Journal:  Stand Genomic Sci       Date:  2010-01-28

9.  SORGOdb: Superoxide Reductase Gene Ontology curated DataBase.

Authors:  Céline Lucchetti-Miganeh; David Goudenège; David Thybert; Gilles Salbert; Frédérique Barloy-Hubler
Journal:  BMC Microbiol       Date:  2011-05-16       Impact factor: 3.605

10.  Microbes vs. chemistry in the origin of the anaerobic gut lumen.

Authors:  Elliot S Friedman; Kyle Bittinger; Tatiana V Esipova; Likai Hou; Lillian Chau; Jack Jiang; Clementina Mesaros; Peder J Lund; Xue Liang; Garret A FitzGerald; Mark Goulian; Daeyeon Lee; Benjamin A Garcia; Ian A Blair; Sergei A Vinogradov; Gary D Wu
Journal:  Proc Natl Acad Sci U S A       Date:  2018-04-02       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.