| Literature DB >> 19116063 |
Marinko Dobec1, Dragutin Golubic, Volga Punda-Polic, Franz Kaeppeli, Martin Sievers.
Abstract
We report on the molecular evidence that Dermacentor reticulatus ticks in Croatia are infected with Rickettsia helvetica (10%) or Rickettsia slovaca (2%) or co-infected with both species (1%). These findings expand the knowledge of the geographic distribution of R. helvetica and D. reticulatus ticks.Entities:
Mesh:
Substances:
Year: 2009 PMID: 19116063 PMCID: PMC2660705 DOI: 10.3201/eid1501.080815
Source DB: PubMed Journal: Emerg Infect Dis ISSN: 1080-6040 Impact factor: 6.883
Primers and probes designed for real-time PCR*
| Species | Primers and probe | Sequence (5′ → 3′) |
|---|---|---|
|
| GATTTCGACGGTAAAATTACC | |
| GCTACCGATATTACCTACAG | ||
|
| ACTCTACTGCTACAAGTATGGTTGCTACAG | |
|
| GTGATAATGTTGGCAATAATAATTGG | |
| CTCTCGTTATAATCGAACCAAC | ||
|
| CAGCAGGAGTACCATTAGCTACCCCTCC | |
| ITS_forward | GTGCGTCCGTCGACTCGTTTTGA | |
| ITS_reverse | ACGGCGGACTACGACGGAATGC |
*Amplified products: 162 bp (R. helvetica); 228 bp (R. slovaca); 646 bp (D. reticulatus); standard curve: slope; Y-intercept and correlation coefficient: –3.634, 40.129, 0.9937 (R. helvetica); –0.23, 42.82, 0.9942 (R. slovaca); ITS, internal transcribed spacer. †The TaqMan probes were labeled with the fluorescent dyes FAM at the 5' end and TAMRA as quencher at the 3' end.
Identification of Dermacentor, Rickettsia, and Borrelia species by molecular methods
| Species | Identification method | Targeting sequence | Confirmation | Results |
|---|---|---|---|---|
| PCR | ITS2 (646 bp) | Sequencing | 13/13 (100%) positive;* 99.8% identical to
| |
| Real-time PCR | Sequencing | 11/100 (11%) positive;† 100% identical to
| ||
| Real-time PCR | Sequencing | 3/100 (3%) positive;† 100% identical to
| ||
| Real-time PCR | Not done (PCR negative) | 0/100 positive; not detected in
|
*Only infected ticks (13 ticks) were identified by molecular methods (PCR and sequencing). †100 ticks were analyzed; 10 were positive for R. helvetica only, 2 for R. slovaca; 1 was co-infected with R. helvetica and R. slovaca. ‡ GenBank accession nos. EU622810, DQ649052, DQ649051, DQ649050, DQ649049, DQ649048, DQ649047, DQ649046, DQ649045, DQ649030, DQ649029, Q649027, DQ649054, DQ649053, and U43808. §DNA of B. burgdorferi DSM 4680 and B. afzelii DSM 10508 were used as positive controls.