Literature DB >> 19111926

Gene synthesis demystified.

Michael J Czar1, J Christopher Anderson, Joel S Bader, Jean Peccoud.   

Abstract

DNA fabrication of genetic cassettes at base-level precision is transforming genetic engineering from a laborious art to an information-driven discipline. Although substantial advances have been made in the development of DNA fabrication, the methods employed vary widely based on the length of the DNA. All of these methods are available commercially, but can also be performed at the molecular biology bench using typical reagents and procedures. Because the technology is not mature and is still evolving rapidly, it is helpful to gain some understanding of the different steps in this process and the associated technical challenges to successfully take advantage of DNA fabrication in a research project.

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Year:  2008        PMID: 19111926     DOI: 10.1016/j.tibtech.2008.10.007

Source DB:  PubMed          Journal:  Trends Biotechnol        ISSN: 0167-7799            Impact factor:   19.536


  52 in total

1.  Multifactorial determinants of protein expression in prokaryotic open reading frames.

Authors:  Malin Allert; J Colin Cox; Homme W Hellinga
Journal:  J Mol Biol       Date:  2010-08-18       Impact factor: 5.469

2.  The GeneOptimizer Algorithm: using a sliding window approach to cope with the vast sequence space in multiparameter DNA sequence optimization.

Authors:  David Raab; Marcus Graf; Frank Notka; Thomas Schödl; Ralf Wagner
Journal:  Syst Synth Biol       Date:  2010-09-01

Review 3.  Genetic design automation: engineering fantasy or scientific renewal?

Authors:  Matthew W Lux; Brian W Bramlett; David A Ball; Jean Peccoud
Journal:  Trends Biotechnol       Date:  2011-10-14       Impact factor: 19.536

Review 4.  Opportunities for microfluidic technologies in synthetic biology.

Authors:  Shelly Gulati; Vincent Rouilly; Xize Niu; James Chappell; Richard I Kitney; Joshua B Edel; Paul S Freemont; Andrew J deMello
Journal:  J R Soc Interface       Date:  2009-05-27       Impact factor: 4.118

Review 5.  Genome engineering.

Authors:  Peter A Carr; George M Church
Journal:  Nat Biotechnol       Date:  2009-12       Impact factor: 54.908

6.  Preventing the misuse of gene synthesis.

Authors:  Jeremy Minshull; Ralf Wagner
Journal:  Nat Biotechnol       Date:  2009-09       Impact factor: 54.908

7.  Strengths and limitations of the federal guidance on synthetic DNA.

Authors:  Laura Adam; Michael Kozar; Gaelle Letort; Olivier Mirat; Arunima Srivastava; Tyler Stewart; Mandy L Wilson; Jean Peccoud
Journal:  Nat Biotechnol       Date:  2011-03       Impact factor: 54.908

8.  Modeling structure-function relationships in synthetic DNA sequences using attribute grammars.

Authors:  Yizhi Cai; Matthew W Lux; Laura Adam; Jean Peccoud
Journal:  PLoS Comput Biol       Date:  2009-10-09       Impact factor: 4.475

Review 9.  Toward engineering synthetic microbial metabolism.

Authors:  George H McArthur; Stephen S Fong
Journal:  J Biomed Biotechnol       Date:  2009-12-14

10.  Automated design of synthetic ribosome binding sites to control protein expression.

Authors:  Howard M Salis; Ethan A Mirsky; Christopher A Voigt
Journal:  Nat Biotechnol       Date:  2009-10-04       Impact factor: 54.908

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