Literature DB >> 19111174

Measuring CPEB-mediated cytoplasmic polyadenylation-deadenylation in Xenopus laevis oocytes and egg extracts.

Jong Heon Kim1, Joel D Richter.   

Abstract

The regulation of poly(A) tail length is one important mechanism for controlling gene expression during early animal development. In Xenopus oocytes, the polyadenylation-deadenylation of several essential dormant mRNAs, including cyclin B1 mRNA, are controlled by the cis-acting cytoplasmic polyadenylation element (CPE) and the hexanucleotide AAUAAA through their associations with protein factors CPEB and CPSF, respectively. CPE-containing, as well as CPE-lacking, pre-mRNAs acquire long poly(A) tails in the nucleus; after their export to the cytoplasm, there is subsequent deadenylation of CPE-containing mRNAs that is controlled by the CPEB-associated factor PARN, a poly(A)-specific ribonuclease. In general, re-adenylation after meiotic maturation of CPE-containing mRNAs is mediated by Gld2, a poly(A) polymerase. Moreover, embryonic poly(A)-binding protein, ePAB, is required for the subsequent elongation and stabilization of the poly(A) tail against PARN and other deadenylating enzymes. In this chapter, we present detailed information for measuring CPEB-mediated cytoplasmic polyadenylation-deadenylation in Xenopus laevis oocytes and egg extracts.

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Year:  2008        PMID: 19111174     DOI: 10.1016/S0076-6879(08)02607-4

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  8 in total

Review 1.  To polyadenylate or to deadenylate: that is the question.

Authors:  Xiaokan Zhang; Anders Virtanen; Frida E Kleiman
Journal:  Cell Cycle       Date:  2010-11-15       Impact factor: 4.534

2.  Time of day regulates subcellular trafficking, tripartite synaptic localization, and polyadenylation of the astrocytic Fabp7 mRNA.

Authors:  Jason R Gerstner; William M Vanderheyden; Timothy LaVaute; Cara J Westmark; Labib Rouhana; Allan I Pack; Marv Wickens; Charles F Landry
Journal:  J Neurosci       Date:  2012-01-25       Impact factor: 6.167

Review 3.  Translational activation of maternally derived mRNAs in oocytes and early embryos and the role of embryonic poly(A) binding protein (EPAB).

Authors:  Ecem Esencan; Amanda Kallen; Man Zhang; Emre Seli
Journal:  Biol Reprod       Date:  2019-05-01       Impact factor: 4.285

4.  An integrated in silico approach to design specific inhibitors targeting human poly(a)-specific ribonuclease.

Authors:  Dimitrios Vlachakis; Athanasia Pavlopoulou; Georgia Tsiliki; Dimitri Komiotis; Constantinos Stathopoulos; Nikolaos A A Balatsos; Sophia Kossida
Journal:  PLoS One       Date:  2012-12-06       Impact factor: 3.240

5.  Punctuated cyclin synthesis drives early embryonic cell cycle oscillations.

Authors:  Qing Kang; Joseph R Pomerening
Journal:  Mol Biol Cell       Date:  2011-11-30       Impact factor: 4.138

6.  An oocyte-specific ELAVL2 isoform is a translational repressor ablated from meiotically competent antral oocytes.

Authors:  Katerina Chalupnikova; Petr Solc; Vadym Sulimenko; Radislav Sedlacek; Petr Svoboda
Journal:  Cell Cycle       Date:  2014-02-11       Impact factor: 4.534

7.  CPEB1 modulates differentiation of glioma stem cells via downregulation of HES1 and SIRT1 expression.

Authors:  Jinlong Yin; Gunwoo Park; Jeong Eun Lee; Ju Young Park; Tae-Hoon Kim; Youn-Jae Kim; Seung-Hoon Lee; Heon Yoo; Jong Heon Kim; Jong Bae Park
Journal:  Oncotarget       Date:  2014-08-30

Review 8.  Trans-acting translational regulatory RNA binding proteins.

Authors:  Robert F Harvey; Tom S Smith; Thomas Mulroney; Rayner M L Queiroz; Mariavittoria Pizzinga; Veronica Dezi; Eneko Villenueva; Manasa Ramakrishna; Kathryn S Lilley; Anne E Willis
Journal:  Wiley Interdiscip Rev RNA       Date:  2018-01-17       Impact factor: 9.349

  8 in total

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