Literature DB >> 19110432

Temporal and spatial control of germ-plasm RNAs.

Prashanth Rangan1, Matthew DeGennaro, Kean Jaime-Bustamante, Rémi-Xavier Coux, Rui G Martinho, Ruth Lehmann.   

Abstract

In many species, germ cells form in a specialized germ plasm, which contains localized maternal RNAs. In the absence of active transcription in early germ cells, these maternal RNAs encode germ-cell components with critical functions in germ-cell specification, migration, and development. For several RNAs, localization has been correlated with release from translational repression, suggesting an important regulatory function linked to localization. To address the role of RNA localization and translational control more systematically, we assembled a comprehensive set of RNAs that are localized to polar granules, the characteristic germ-plasm organelles. We find that the 3'-untranslated regions (UTRs) of all RNAs tested control RNA localization and instruct distinct temporal patterns of translation of the localized RNAs. We demonstrate necessity for translational timing by swapping the 3'UTR of polar granule component (pgc), which controls translation in germ cells, with that of nanos, which is translated earlier. Translational activation of pgc is concurrent with extension of its poly(A) tail length but appears largely independent of the Drosophila CPEB homolog ORB. Our results demonstrate a role for 3'UTR mediated translational regulation in fine-tuning the temporal expression of localized RNA, and this may provide a paradigm for other RNAs that are found enriched at distinct cellular locations such as the leading edge of fibroblasts or the neuronal synapse.

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Year:  2008        PMID: 19110432      PMCID: PMC2766415          DOI: 10.1016/j.cub.2008.11.066

Source DB:  PubMed          Journal:  Curr Biol        ISSN: 0960-9822            Impact factor:   10.834


  48 in total

1.  Presence of mitochondria-type ribosomes outside mitochondria in germ plasm of Drosophila embryos.

Authors:  R Amikura; M Kashikawa; A Nakamura; S Kobayashi
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-24       Impact factor: 11.205

2.  A noncoding RNA is required for the repression of RNApolII-dependent transcription in primordial germ cells.

Authors:  Rui Gonçalo Martinho; Prabhat S Kunwar; Jordi Casanova; Ruth Lehmann
Journal:  Curr Biol       Date:  2004-01-20       Impact factor: 10.834

Review 3.  Putting RNAs in the right place at the right time: RNA localization in the frog oocyte.

Authors:  Mary Lou King; Timothy J Messitt; Kimberly L Mowry
Journal:  Biol Cell       Date:  2005-01       Impact factor: 4.458

4.  Identification of cis-acting sequences that control nanos RNA localization.

Authors:  E R Gavis; D Curtis; R Lehmann
Journal:  Dev Biol       Date:  1996-05-25       Impact factor: 3.582

5.  Translational regulation of nanos by RNA localization.

Authors:  E R Gavis; R Lehmann
Journal:  Nature       Date:  1994-05-26       Impact factor: 49.962

6.  An evolutionary conserved region in the vasa 3'UTR targets RNA translation to the germ cells in the zebrafish.

Authors:  Holger Knaut; Herbert Steinbeisser; Heinz Schwarz; Christiane Nüsslein-Volhard
Journal:  Curr Biol       Date:  2002-03-19       Impact factor: 10.834

7.  Requirement for a noncoding RNA in Drosophila polar granules for germ cell establishment.

Authors:  A Nakamura; R Amikura; M Mukai; S Kobayashi; P F Lasko
Journal:  Science       Date:  1996-12-20       Impact factor: 47.728

8.  orb is required for anteroposterior and dorsoventral patterning during Drosophila oogenesis.

Authors:  L B Christerson; D M McKearin
Journal:  Genes Dev       Date:  1994-03-01       Impact factor: 11.361

9.  Control of lateral migration and germ cell elimination by the Drosophila melanogaster lipid phosphate phosphatases Wunen and Wunen 2.

Authors:  Hiroko Sano; Andrew D Renault; Ruth Lehmann
Journal:  J Cell Biol       Date:  2005-11-21       Impact factor: 10.539

10.  Global analysis of patterns of gene expression during Drosophila embryogenesis.

Authors:  Pavel Tomancak; Benjamin P Berman; Amy Beaton; Richard Weiszmann; Elaine Kwan; Volker Hartenstein; Susan E Celniker; Gerald M Rubin
Journal:  Genome Biol       Date:  2007       Impact factor: 13.583

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  46 in total

1.  The C. elegans homolog of nucleoporin Nup98 is required for the integrity and function of germline P granules.

Authors:  Ekaterina Voronina; Geraldine Seydoux
Journal:  Development       Date:  2010-03-24       Impact factor: 6.868

Review 2.  Translational control in oocyte development.

Authors:  Joel D Richter; Paul Lasko
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-09-01       Impact factor: 10.005

Review 3.  RNA granules in germ cells.

Authors:  Ekaterina Voronina; Geraldine Seydoux; Paolo Sassone-Corsi; Ippei Nagamori
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-12-01       Impact factor: 10.005

4.  Distinct cis-acting elements mediate targeting and clustering of Drosophila polar granule mRNAs.

Authors:  Whitby V I Eagle; Daniel K Yeboah-Kordieh; Matthew G Niepielko; Elizabeth R Gavis
Journal:  Development       Date:  2018-11-22       Impact factor: 6.868

Review 5.  Translational Control during Developmental Transitions.

Authors:  Felipe Karam Teixeira; Ruth Lehmann
Journal:  Cold Spring Harb Perspect Biol       Date:  2019-06-03       Impact factor: 10.005

6.  A novel, noncanonical mechanism of cytoplasmic polyadenylation operates in Drosophila embryogenesis.

Authors:  Olga Coll; Ana Villalba; Giovanni Bussotti; Cedric Notredame; Fátima Gebauer
Journal:  Genes Dev       Date:  2010-01-15       Impact factor: 11.361

7.  Sequence-Independent Self-Assembly of Germ Granule mRNAs into Homotypic Clusters.

Authors:  Tatjana Trcek; Tyler E Douglas; Markus Grosch; Yandong Yin; Whitby V I Eagle; Elizabeth R Gavis; Hari Shroff; Eli Rothenberg; Ruth Lehmann
Journal:  Mol Cell       Date:  2020-05-27       Impact factor: 17.970

8.  The Nanos3-3'UTR is required for germ cell specific NANOS3 expression in mouse embryos.

Authors:  Hitomi Suzuki; Rie Saba; Aiko Sada; Yumiko Saga
Journal:  PLoS One       Date:  2010-02-18       Impact factor: 3.240

Review 9.  Germ Plasm Biogenesis--An Oskar-Centric Perspective.

Authors:  Ruth Lehmann
Journal:  Curr Top Dev Biol       Date:  2016-02-13       Impact factor: 4.897

10.  Cytoplasmic polyadenylation and cytoplasmic polyadenylation element-dependent mRNA regulation are involved in Xenopus retinal axon development.

Authors:  Andrew C Lin; Chin Lik Tan; Chien-Ling Lin; Laure Strochlic; Yi-Shuian Huang; Joel D Richter; Christine E Holt
Journal:  Neural Dev       Date:  2009-03-02       Impact factor: 3.842

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