Literature DB >> 19109895

Translation initiation on mammalian mRNAs with structured 5'UTRs requires DExH-box protein DHX29.

Vera P Pisareva1, Andrey V Pisarev, Anton A Komar, Christopher U T Hellen, Tatyana V Pestova.   

Abstract

Eukaryotic protein synthesis begins with assembly of 48S initiation complexes at the initiation codon of mRNA, which requires at least seven initiation factors (eIFs). First, 43S preinitiation complexes comprising 40S ribosomal subunits, eIFs 3, 2, 1, and 1A, and tRNA(Met)(i) attach to the 5'-proximal region of mRNA and then scan along the 5' untranslated region (5'UTR) to the initiation codon. Attachment of 43S complexes is mediated by three other eIFs, 4F, 4A, and 4B, which cooperatively unwind the cap-proximal region of mRNA and later also assist 43S complexes during scanning. We now report that these seven eIFs are not sufficient for efficient 48S complex formation on mRNAs with highly structured 5'UTRs, and that this process requires the DExH-box protein DHX29. DHX29 binds 40S subunits and hydrolyzes ATP, GTP, UTP, and CTP. NTP hydrolysis by DHX29 is strongly stimulated by 43S complexes and is required for DHX29's activity in promoting 48S complex formation.

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Year:  2008        PMID: 19109895      PMCID: PMC2948571          DOI: 10.1016/j.cell.2008.10.037

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  36 in total

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Authors:  Oona Johnstone; Paul Lasko
Journal:  Development       Date:  2004-07-27       Impact factor: 6.868

Review 2.  Structural features in eukaryotic mRNAs that modulate the initiation of translation.

Authors:  M Kozak
Journal:  J Biol Chem       Date:  1991-10-25       Impact factor: 5.157

3.  The ATP requirement for initiation of eukaryotic translation varies according to the mRNA species.

Authors:  R J Jackson
Journal:  Eur J Biochem       Date:  1991-09-01

4.  The roles of individual eukaryotic translation initiation factors in ribosomal scanning and initiation codon selection.

Authors:  Tatyana V Pestova; Victoria G Kolupaeva
Journal:  Genes Dev       Date:  2002-11-15       Impact factor: 11.361

5.  The Q motif: a newly identified motif in DEAD box helicases may regulate ATP binding and hydrolysis.

Authors:  N Kyle Tanner; Olivier Cordin; Josette Banroques; Monique Doère; Patrick Linder
Journal:  Mol Cell       Date:  2003-01       Impact factor: 17.970

6.  Position of the CrPV IRES on the 40S subunit and factor dependence of IRES/80S ribosome assembly.

Authors:  Tatyana V Pestova; Ivan B Lomakin; Christopher U T Hellen
Journal:  EMBO Rep       Date:  2004-09       Impact factor: 8.807

7.  Cryo-EM visualization of a viral internal ribosome entry site bound to human ribosomes: the IRES functions as an RNA-based translation factor.

Authors:  Christian M T Spahn; Eric Jan; Anke Mulder; Robert A Grassucci; Peter Sarnow; Joachim Frank
Journal:  Cell       Date:  2004-08-20       Impact factor: 41.582

8.  Position of eukaryotic initiation factor eIF1 on the 40S ribosomal subunit determined by directed hydroxyl radical probing.

Authors:  Ivan B Lomakin; Victoria G Kolupaeva; Assen Marintchev; Gerhard Wagner; Tatyana V Pestova
Journal:  Genes Dev       Date:  2003-11-04       Impact factor: 11.361

9.  What determines whether mammalian ribosomes resume scanning after translation of a short upstream open reading frame?

Authors:  Tuija A A Pöyry; Ann Kaminski; Richard J Jackson
Journal:  Genes Dev       Date:  2003-12-30       Impact factor: 11.361

10.  Initiation of encephalomyocarditis virus RNA translation: the authentic initiation site is not selected by a scanning mechanism.

Authors:  A Kaminski; M T Howell; R J Jackson
Journal:  EMBO J       Date:  1990-11       Impact factor: 11.598

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  118 in total

Review 1.  A mechanistic overview of translation initiation in eukaryotes.

Authors:  Colin Echeverría Aitken; Jon R Lorsch
Journal:  Nat Struct Mol Biol       Date:  2012-06-05       Impact factor: 15.369

2.  The eukaryotic initiation factor (eIF) 4G HEAT domain promotes translation re-initiation in yeast both dependent on and independent of eIF4A mRNA helicase.

Authors:  Ryosuke Watanabe; Marcelo Jun Murai; Chingakham Ranjit Singh; Stephanie Fox; Miki Ii; Katsura Asano
Journal:  J Biol Chem       Date:  2010-05-12       Impact factor: 5.157

3.  Bypassing of stems versus linear base-by-base inspection of mammalian mRNAs during ribosomal scanning.

Authors:  Irina S Abaeva; Assen Marintchev; Vera P Pisareva; Christopher U T Hellen; Tatyana V Pestova
Journal:  EMBO J       Date:  2010-11-26       Impact factor: 11.598

Review 4.  Translation initiation of the HIV-1 mRNA.

Authors:  Théophile Ohlmann; Chloé Mengardi; Marcelo López-Lastra
Journal:  Translation (Austin)       Date:  2014-10-31

5.  Translation efficiency of mRNAs is increased by antisense oligonucleotides targeting upstream open reading frames.

Authors:  Xue-Hai Liang; Wen Shen; Hong Sun; Michael T Migawa; Timothy A Vickers; Stanley T Crooke
Journal:  Nat Biotechnol       Date:  2016-07-11       Impact factor: 54.908

Review 6.  uORF-mediated translational control: recently elucidated mechanisms and implications in cancer.

Authors:  Hung-Hsi Chen; Woan-Yuh Tarn
Journal:  RNA Biol       Date:  2019-06-24       Impact factor: 4.652

Review 7.  Splicing fidelity: DEAD/H-box ATPases as molecular clocks.

Authors:  Prakash Koodathingal; Jonathan P Staley
Journal:  RNA Biol       Date:  2013-06-03       Impact factor: 4.652

8.  The helicase protein DHX29 promotes translation initiation, cell proliferation, and tumorigenesis.

Authors:  Armen Parsyan; David Shahbazian; Yvan Martineau; Emmanuel Petroulakis; Tommy Alain; Ola Larsson; Geraldine Mathonnet; Gritta Tettweiler; Christopher U Hellen; Tatyana V Pestova; Yuri V Svitkin; Nahum Sonenberg
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-11       Impact factor: 11.205

Review 9.  Regulation of translation initiation in eukaryotes: mechanisms and biological targets.

Authors:  Nahum Sonenberg; Alan G Hinnebusch
Journal:  Cell       Date:  2009-02-20       Impact factor: 41.582

10.  Control of cell survival and proliferation by mammalian eukaryotic initiation factor 4B.

Authors:  David Shahbazian; Armen Parsyan; Emmanuel Petroulakis; Ivan Topisirovic; Yvan Martineau; Bernard F Gibbs; Yuri Svitkin; Nahum Sonenberg
Journal:  Mol Cell Biol       Date:  2010-01-19       Impact factor: 4.272

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