Literature DB >> 19107604

Full-Length gene enrichment by using an optimized RNA isolation protocol in Bixa orellana recalcitrant tissues.

N L Rodríguez-Avila1, J A Narváez-Zapata, M L Aguilar-Espinosa, R Rivera-Madrid.   

Abstract

A reliable protocol is described for isolation of large full-length cDNA from Bixa orellana mature tissues containing large quantities of pigments, phenols, and polysaccharides. This protocol involves the optimization of a commercial RNA extraction protocol in combination with a long distance reverse transcript PCR protocol. The principal advantages of this protocol are its high RNA yield and quality. The resulting RNA is suitable for RNA expression evaluation and production of large, full-length cDNA. This is the first time RNA has been isolated from all mature tissues in the tropical perennial plant B. orellana and has been proved viable for downstream applications, especially important for molecular biology studies on this economically important pigment-producing plant.

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Year:  2008        PMID: 19107604     DOI: 10.1007/s12033-008-9138-4

Source DB:  PubMed          Journal:  Mol Biotechnol        ISSN: 1073-6085            Impact factor:   2.695


  15 in total

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2.  RNA isolation from plant tissues rich in polysaccharides.

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3.  Structural characterization of a rice actin gene.

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5.  Urea as the only inactivator of RNase for extraction of total RNA from plant and animal tissues.

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6.  Evaluation of eight RNA isolation methods for transcriptional analysis in Campylobacter jejuni.

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8.  Isolation and purification of functional total RNA from different organs of cacao tree during its interaction with the pathogen Crinipellis perniciosa.

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Journal:  Biotechniques       Date:  2003-09       Impact factor: 1.993

9.  Isolation and purification of RNA from tissues rich in polyphenols, polysaccharides, and pigments of annatto (Bixa orellana L.).

Authors:  Simone M Rodrigues; Virgínia L F Soares; Tahise M de Oliveira; Abelmon S Gesteira; Wagner C Otoni; Marcio G C Costa
Journal:  Mol Biotechnol       Date:  2007-08-08       Impact factor: 2.695

10.  Biosynthesis of the food and cosmetic plant pigment bixin (annatto).

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  5 in total

1.  Gene expression analysis during the fruit development in dehiscent and indehiscent Bixa orellana L. accessions.

Authors:  R Tamayo-García; J A Narváez-Zapata; A Ku-González; M Aguilar-Espinosa; L C Gutiérrez-Pacheco; R Rivera-Madrid
Journal:  Physiol Mol Biol Plants       Date:  2022-05-06

2.  Identification and expression pattern of a new carotenoid cleavage dioxygenase gene member from Bixa orellana.

Authors:  N L Rodríguez-Ávila; J A Narváez-Zapata; J E Ramírez-Benítez; M L Aguilar-Espinosa; R Rivera-Madrid
Journal:  J Exp Bot       Date:  2011-08-03       Impact factor: 6.992

3.  De novo transcriptome sequencing in Bixa orellana to identify genes involved in methylerythritol phosphate, carotenoid and bixin biosynthesis.

Authors:  Yair Cárdenas-Conejo; Víctor Carballo-Uicab; Meric Lieberman; Margarita Aguilar-Espinosa; Luca Comai; Renata Rivera-Madrid
Journal:  BMC Genomics       Date:  2015-10-28       Impact factor: 3.969

4.  Identifying Bixa orellana L. New Carotenoid Cleavage Dioxygenases 1 and 4 Potentially Involved in Bixin Biosynthesis.

Authors:  Rosa Us-Camas; Margarita Aguilar-Espinosa; Jacobo Rodríguez-Campos; Alba Adriana Vallejo-Cardona; Víctor Manuel Carballo-Uicab; Hugo Serrano-Posada; Renata Rivera-Madrid
Journal:  Front Plant Sci       Date:  2022-02-11       Impact factor: 5.753

Review 5.  The biotechnology (genetic transformation and molecular biology) of Bixa orellana L. (achiote).

Authors:  Jaime A Teixeira da Silva; Judit Dobránszki; Renata Rivera-Madrid
Journal:  Planta       Date:  2018-05-10       Impact factor: 4.116

  5 in total

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