Literature DB >> 19096885

Conformational and electronic (AIM/NBO) study of unsubstituted A-type dimeric proanthocyanidin.

Rosana M Lobayan1, Alicia H Jubert, Martín G Vitale, Alicia B Pomilio.   

Abstract

UNLABELLED: The conformational space of the unsubstituted A-type dimeric proanthocyanidin was scanned using molecular dynamics at a semiempirical level, and complemented with functional density calculations. The lowest energy conformers were obtained. Electronic distributions were analysed at a higher calculation level, thus improving the basis set. A topological study based on Bader's theory ( AIM: atoms in molecules) and natural bond orbital (NBO) framework was performed. Furthermore, molecular electrostatic potential maps (MEPs) were obtained and analysed. NMR chemical shifts were calculated at ab initio level and further compared with previous experimental values; coupling constants were also calculated. The stereochemistry of the molecule is thoroughly discussed, revealing the key role that hyperconjugative interactions play in defining experimental trends. These results show the versatility of geminal spin-spin coupling (2)J(C-1',O) as a probe for stereochemical studies of proanthocyanidins.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 19096885     DOI: 10.1007/s00894-008-0389-6

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  7 in total

1.  Modeling of protonation processes in acetohydroxamic acid

Authors: 
Journal:  J Org Chem       Date:  2000-01-28       Impact factor: 4.354

2.  Electronic basis of improper hydrogen bonding: a subtle balance of hyperconjugation and rehybridization.

Authors:  Igor V Alabugin; Mariappan Manoharan; Scott Peabody; Frank Weinhold
Journal:  J Am Chem Soc       Date:  2003-05-14       Impact factor: 15.419

3.  Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density.

Authors: 
Journal:  Phys Rev B Condens Matter       Date:  1988-01-15

4.  Antioxidative effects of green tea polyphenols on free radical initiated and photosensitized peroxidation of human low density lipoprotein.

Authors:  Z Liu; L P Ma; B Zhou; L Yang; Z L Liu
Journal:  Chem Phys Lipids       Date:  2000-06       Impact factor: 3.329

Review 5.  Procyanidin effects on adipocyte-related pathologies.

Authors:  Montse Pinent; Cinta Bladé; M Josepa Salvadó; Mayte Blay; Gerard Pujadas; Juan Fernández-Larrea; Lluís Arola; Anna Ardévol
Journal:  Crit Rev Food Sci Nutr       Date:  2006       Impact factor: 11.176

6.  A study of antioxidant properties of some varieties of grapes (Vitis vinifera L.).

Authors:  Vinayak V Kedage; Jai C Tilak; Ghanasham B Dixit; Thomas P A Devasagayam; Minal Mhatre
Journal:  Crit Rev Food Sci Nutr       Date:  2007       Impact factor: 11.176

Review 7.  Molecular electrostatic potentials: an effective tool for the elucidation of biochemical phenomena.

Authors:  P Politzer; P R Laurence; K Jayasuriya
Journal:  Environ Health Perspect       Date:  1985-09       Impact factor: 9.031

  7 in total
  9 in total

1.  Conformational and stereoelectronic investigation of tryptamine. An AIM/NBO study.

Authors:  Rosana M Lobayan; María C Pérez Schmit; Alicia H Jubert; Arturo Vitale
Journal:  J Mol Model       Date:  2011-11-11       Impact factor: 1.810

2.  Theoretical study of Z isomers of A-type dimeric proanthocyanidins substituted with R=H, OH and OCH₃: stability and reactivity properties.

Authors:  Erika N Bentz; Alicia H Jubert; Alicia B Pomilio; Rosana M Lobayan
Journal:  J Mol Model       Date:  2010-03-17       Impact factor: 1.810

3.  Structural and electronic properties of Z isomers of (4α→6´´,2α→O→1´´)-phenylflavans substituted with R = H, OH and OCH₃ calculated in aqueous solution with PCM solvation model.

Authors:  Rosana Maria Lobayan; Erika N Bentz; Alicia H Jubert; Alicia B Pomilio
Journal:  J Mol Model       Date:  2011-08-03       Impact factor: 1.810

4.  Structure and electronic properties of (+)-catechin: aqueous solvent effects.

Authors:  Erika N Bentz; Alicia B Pomilio; Rosana M Lobayan
Journal:  J Mol Model       Date:  2014-02-14       Impact factor: 1.810

5.  Z-Isomers of (4α→6″, 2α→O→1″)-phenylflavan substituted with R'=R=OH. Conformational properties, electronic structure and aqueous solvent effects.

Authors:  Erika N Bentz; Alicia B Pomilio; Rosana M Lobayan
Journal:  J Mol Model       Date:  2016-07-22       Impact factor: 1.810

6.  Aqueous solvent effects on the conformational space of tryptamine. Structural and electronic analysis.

Authors:  Rosana M Lobayan; María C Pérez Schmit; Alicia H Jubert; Arturo Vitale
Journal:  J Mol Model       Date:  2012-11-13       Impact factor: 1.810

7.  Exploratory conformational study of (+)-catechin. Modeling of the polarizability and electric dipole moment.

Authors:  Erika N Bentz; Alicia B Pomilio; Rosana M Lobayan
Journal:  J Mol Model       Date:  2014-11-29       Impact factor: 1.810

8.  Electronic structure and conformational properties of 1H-indole-3-acetic acid.

Authors:  María C Pérez Schmit; Alicia H Jubert; Arturo Vitale; Rosana M Lobayan
Journal:  J Mol Model       Date:  2010-08-13       Impact factor: 1.810

9.  Molecular structure and electron distribution of 4-nitropyridine N-oxide: Experimental and theoretical study of substituent effects.

Authors:  Natalya V Belova; Oleg A Pimenov; Vitaliya E Kotova; Georgiy V Girichev
Journal:  J Mol Struct       Date:  2020-05-17       Impact factor: 3.196

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.