Literature DB >> 25431187

Exploratory conformational study of (+)-catechin. Modeling of the polarizability and electric dipole moment.

Erika N Bentz1, Alicia B Pomilio, Rosana M Lobayan.   

Abstract

The extension of the study of the conformational space of the structure of (+)-catechin at the B3LYP/6-31G(d,p) level of theory is presented in this paper. (+)-Catechin belongs to the family of the flavan-3-ols, which is one of the five largest phenolic groups widely distributed in nature, and whose biological activity and pharmaceutical utility are related to the antioxidant activity due to their ability to scavenge free radicals. The effects of free rotation around all C-O bonds of the OH substituents at different rings are taken into account, obtaining as the most stable conformer, one that had not been previously reported. One hundred seven structures, and a study of the effects of charge delocalization and stereoelectronic effects at the B3LYP/6-311++G(d,p) level are reported by natural bond orbital analysis, streamlining the order of these structures. For further analysis of the structural and molecular properties of this compound in a biological environment, the calculation of polarizabilities, and the study of the electric dipole moment are performed considering the whole conformational space described. The results are analyzed in terms of accumulated knowledge for (4α → 6″, 2α → O → 1″)-phenylflavans and (+)-catechin in previous works, enriching the study of both types of structures, and taking into account the importance of considering the whole conformational space in modeling both the polarizability and the electric dipole moment, also proposing to define a descriptive subspace of only 16 conformers.

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Year:  2014        PMID: 25431187     DOI: 10.1007/s00894-014-2522-z

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  16 in total

1.  Why B-ring is the active center for genistein to scavenge peroxyl radical: a DFT study.

Authors:  Hong-Yu Zhang; Lan-Fen Wang; You-Min Sun
Journal:  Bioorg Med Chem Lett       Date:  2003-03-10       Impact factor: 2.823

2.  The use of classification methods for modeling the antioxidant activity of flavonoid compounds.

Authors:  Karen C Weber; Káthia M Honório; Aline T Bruni; Albérico B F da Silva
Journal:  J Mol Model       Date:  2006-04-07       Impact factor: 1.810

3.  Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density.

Authors: 
Journal:  Phys Rev B Condens Matter       Date:  1988-01-15

4.  Structural and electronic properties of Z isomers of (4α→6´´,2α→O→1´´)-phenylflavans substituted with R = H, OH and OCH₃ calculated in aqueous solution with PCM solvation model.

Authors:  Rosana Maria Lobayan; Erika N Bentz; Alicia H Jubert; Alicia B Pomilio
Journal:  J Mol Model       Date:  2011-08-03       Impact factor: 1.810

5.  Naturally-occurring dimers of flavonoids as anticarcinogens.

Authors:  Andrew G Mercader; Alicia B Pomilio
Journal:  Anticancer Agents Med Chem       Date:  2013-10       Impact factor: 2.505

6.  (Iso)flav(an)ones, chalcones, catechins, and theaflavins as anticarcinogens: mechanisms, anti-multidrug resistance and QSAR studies.

Authors:  Andrew G Mercader; Alicia B Pomilio
Journal:  Curr Med Chem       Date:  2012       Impact factor: 4.530

7.  A comparative study of the antioxidant power of flavonoid catechin and its planar analogue.

Authors:  Monica Leopoldini; Nino Russo; Marirosa Toscano
Journal:  J Agric Food Chem       Date:  2007-08-21       Impact factor: 5.279

8.  Permanent electric dipole moments of four tryptamine conformers in the gas phase: a new diagnostic of structure and dynamics.

Authors:  Tri V Nguyen; David W Pratt
Journal:  J Chem Phys       Date:  2006-02-07       Impact factor: 3.488

9.  Solid state NMR studies and density functional theory (DFT) calculations of conformers of quercetin.

Authors:  Sebastian Olejniczak; Marek J Potrzebowski
Journal:  Org Biomol Chem       Date:  2004-07-27       Impact factor: 3.876

10.  Free radical-scavenging properties of olive oil polyphenols.

Authors:  F Visioli; G Bellomo; C Galli
Journal:  Biochem Biophys Res Commun       Date:  1998-06-09       Impact factor: 3.575

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  1 in total

1.  Z-Isomers of (4α→6″, 2α→O→1″)-phenylflavan substituted with R'=R=OH. Conformational properties, electronic structure and aqueous solvent effects.

Authors:  Erika N Bentz; Alicia B Pomilio; Rosana M Lobayan
Journal:  J Mol Model       Date:  2016-07-22       Impact factor: 1.810

  1 in total

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