Literature DB >> 19089684

RNA under attack: cellular handling of RNA damage.

Elisabeth J Wurtmann1, Sandra L Wolin.   

Abstract

Damage to RNA from ultraviolet light, oxidation, chlorination, nitration, and akylation can include chemical modifications to nucleobases as well as RNA-RNA and RNA-protein crosslinking. In vitro studies have described a range of possible damage products, some of which are supported as physiologically relevant by in vivo observations in normal growth, stress conditions, or disease states. Damage to both messenger RNA and noncoding RNA may have functional consequences, and work has begun to elucidate the role of RNA turnover pathways and specific damage recognition pathways in clearing cells of these damaged RNAs.

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Year:  2009        PMID: 19089684      PMCID: PMC2656420          DOI: 10.1080/10409230802594043

Source DB:  PubMed          Journal:  Crit Rev Biochem Mol Biol        ISSN: 1040-9238            Impact factor:   8.250


  137 in total

Review 1.  P bodies: at the crossroads of post-transcriptional pathways.

Authors:  Ana Eulalio; Isabelle Behm-Ansmant; Elisa Izaurralde
Journal:  Nat Rev Mol Cell Biol       Date:  2007-01       Impact factor: 94.444

2.  Revisiting the photochemistry of solar UVA in human skin.

Authors:  David Mitchell
Journal:  Proc Natl Acad Sci U S A       Date:  2006-09-05       Impact factor: 11.205

3.  Chemical modification of viral ribonucleic acid. IX. The effect of ultraviolet irradiation on TMV-RNA and other polynucleotides.

Authors:  B Singer
Journal:  Virology       Date:  1971-07       Impact factor: 3.616

4.  Quantification of 8-oxo-guanine and guanine as the nucleobase, nucleoside and deoxynucleoside forms in human urine by high-performance liquid chromatography-electrospray tandem mass spectrometry.

Authors:  Allan Weimann; Dorthe Belling; Henrik E Poulsen
Journal:  Nucleic Acids Res       Date:  2002-01-15       Impact factor: 16.971

5.  Specific binding of 8-oxoguanine-containing RNA to polynucleotide phosphorylase protein.

Authors:  H Hayakawa; M Kuwano; M Sekiguchi
Journal:  Biochemistry       Date:  2001-08-21       Impact factor: 3.162

Review 6.  NO* chemistry: a diversity of targets in the cell.

Authors:  Tiffany A Reiter
Journal:  Redox Rep       Date:  2006       Impact factor: 4.412

7.  Protein-RNA cross-linking in the ribosomes of yeast under oxidative stress.

Authors:  Hamid Mirzaei; Fred Regnier
Journal:  J Proteome Res       Date:  2006-12       Impact factor: 4.466

8.  Cell transformation by the superoxide-generating oxidase Mox1.

Authors:  Y A Suh; R S Arnold; B Lassegue; J Shi; X Xu; D Sorescu; A B Chung; K K Griendling; J D Lambeth
Journal:  Nature       Date:  1999-09-02       Impact factor: 49.962

9.  Photohydration of uridine in the RNA of coliphage R17. II. The relationship between ultraviolet inactivation and uridine photohydration.

Authors:  J F Remsen; N Miller; P A Cerutti
Journal:  Proc Natl Acad Sci U S A       Date:  1970-02       Impact factor: 11.205

10.  RNA-binding proteins TIA-1 and TIAR link the phosphorylation of eIF-2 alpha to the assembly of mammalian stress granules.

Authors:  N L Kedersha; M Gupta; W Li; I Miller; P Anderson
Journal:  J Cell Biol       Date:  1999-12-27       Impact factor: 10.539

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  83 in total

1.  Transcriptional priming of cytoplasmic post-transcriptional regulation.

Authors:  Itay Tirosh
Journal:  Transcription       Date:  2011-11-01

2.  Revisiting the reactivity of uracil during collision induced dissociation: tautomerism and charge-directed processes.

Authors:  Daniel G Beach; Wojciech Gabryelski
Journal:  J Am Soc Mass Spectrom       Date:  2012-02-14       Impact factor: 3.109

3.  A role for a bacterial ortholog of the Ro autoantigen in starvation-induced rRNA degradation.

Authors:  Elisabeth J Wurtmann; Sandra L Wolin
Journal:  Proc Natl Acad Sci U S A       Date:  2010-02-16       Impact factor: 11.205

4.  Ultraviolet radiation damages self noncoding RNA and is detected by TLR3.

Authors:  Jamie J Bernard; Christopher Cowing-Zitron; Teruaki Nakatsuji; Beda Muehleisen; Jun Muto; Andrew W Borkowski; Laisel Martinez; Eric L Greidinger; Benjamin D Yu; Richard L Gallo
Journal:  Nat Med       Date:  2012-07-08       Impact factor: 53.440

5.  Comparison of UV-Induced Inactivation and RNA Damage in MS2 Phage across the Germicidal UV Spectrum.

Authors:  Sara E Beck; Roberto A Rodriguez; Michael A Hawkins; Thomas M Hargy; Thomas C Larason; Karl G Linden
Journal:  Appl Environ Microbiol       Date:  2015-12-28       Impact factor: 4.792

6.  Isolation of high-quality RNA from recalcitrant leaves of variegated and resurrection plants.

Authors:  Marija Vidović; Katarina Ćuković
Journal:  3 Biotech       Date:  2020-06-01       Impact factor: 2.406

Review 7.  Current perspectives on the clinical implications of oxidative RNA damage in aging research: challenges and opportunities.

Authors:  Zhijie Xu; Jinzhou Huang; Ming Gao; Guijie Guo; Shuangshuang Zeng; Xi Chen; Xiang Wang; Zhicheng Gong; Yuanliang Yan
Journal:  Geroscience       Date:  2020-06-11       Impact factor: 7.713

8.  An active role for the ribosome in determining the fate of oxidized mRNA.

Authors:  Carrie L Simms; Benjamin H Hudson; John W Mosior; Ali S Rangwala; Hani S Zaher
Journal:  Cell Rep       Date:  2014-11-13       Impact factor: 9.423

9.  The life story of hydrogen peroxide II: a periodic pH and thermochemical drive for the RNA world.

Authors:  Rowena Ball; John Brindley
Journal:  J R Soc Interface       Date:  2015-08-06       Impact factor: 4.118

Review 10.  Ribosome-based quality control of mRNA and nascent peptides.

Authors:  Carrie L Simms; Erica N Thomas; Hani S Zaher
Journal:  Wiley Interdiscip Rev RNA       Date:  2016-05-18       Impact factor: 9.957

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