Literature DB >> 19086780

Short antisense oligonucleotides with novel 2'-4' conformationaly restricted nucleoside analogues show improved potency without increased toxicity in animals.

Punit P Seth1, Andrew Siwkowski, Charles R Allerson, Guillermo Vasquez, Sam Lee, Thazha P Prakash, Edward V Wancewicz, Donna Witchell, Eric E Swayze.   

Abstract

The potency of second generation antisense oligonucleotides (ASOs) in animals was increased 3- to 5 -fold (ED(50) approximately 2-5 mg/kg) without producing hepatotoxicity, by reducing ASO length (20-mer to 14-mer) and by employing novel nucleoside modifications that combine structural elements of 2'-O-methoxyethyl residues and locked nucleic acid. The ability to achieve this level of potency without any formulation agents is remarkable and likely to have a significant impact on the future design of ASOs as therapeutic agents.

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Year:  2009        PMID: 19086780     DOI: 10.1021/jm801294h

Source DB:  PubMed          Journal:  J Med Chem        ISSN: 0022-2623            Impact factor:   7.446


  82 in total

1.  Synthesis, biophysical properties and biological activity of second generation antisense oligonucleotides containing chiral phosphorothioate linkages.

Authors:  W Brad Wan; Michael T Migawa; Guillermo Vasquez; Heather M Murray; Josh G Nichols; Hans Gaus; Andres Berdeja; Sam Lee; Christopher E Hart; Walt F Lima; Eric E Swayze; Punit P Seth
Journal:  Nucleic Acids Res       Date:  2014-11-14       Impact factor: 16.971

2.  Aster Proteins Regulate the Accessible Cholesterol Pool in the Plasma Membrane.

Authors:  Alessandra Ferrari; Cuiwen He; John Paul Kennelly; Jaspreet Sandhu; Xu Xiao; Xun Chi; Haibo Jiang; Stephen G Young; Peter Tontonoz
Journal:  Mol Cell Biol       Date:  2020-09-14       Impact factor: 4.272

3.  Synthesis and antisense properties of fluoro cyclohexenyl nucleic acid (F-CeNA), a nuclease stable mimic of 2'-fluoro RNA.

Authors:  Punit P Seth; Jinghua Yu; Ali Jazayeri; Pradeep S Pallan; Charles R Allerson; Michael E Østergaard; Fengwu Liu; Piet Herdewijn; Martin Egli; Eric E Swayze
Journal:  J Org Chem       Date:  2012-05-18       Impact factor: 4.354

4.  Structure and nuclease resistance of 2',4'-constrained 2'-O-methoxyethyl (cMOE) and 2'-O-ethyl (cEt) modified DNAs.

Authors:  Pradeep S Pallan; Charles R Allerson; Andres Berdeja; Punit P Seth; Eric E Swayze; Thazha P Prakash; Martin Egli
Journal:  Chem Commun (Camb)       Date:  2012-05-22       Impact factor: 6.222

5.  Synthesis, improved antisense activity and structural rationale for the divergent RNA affinities of 3'-fluoro hexitol nucleic acid (FHNA and Ara-FHNA) modified oligonucleotides.

Authors:  Martin Egli; Pradeep S Pallan; Charles R Allerson; Thazha P Prakash; Andres Berdeja; Jinghua Yu; Sam Lee; Andrew Watt; Hans Gaus; Balkrishen Bhat; Eric E Swayze; Punit P Seth
Journal:  J Am Chem Soc       Date:  2011-09-22       Impact factor: 15.419

Review 6.  The chemical evolution of oligonucleotide therapies of clinical utility.

Authors:  Anastasia Khvorova; Jonathan K Watts
Journal:  Nat Biotechnol       Date:  2017-02-27       Impact factor: 54.908

7.  Duplex RNAs and ss-siRNAs Block RNA Foci Associated with Fuchs' Endothelial Corneal Dystrophy.

Authors:  Jiaxin Hu; Xiulong Shen; Frank Rigo; Thahza P Prakash; V Vinod Mootha; David R Corey
Journal:  Nucleic Acid Ther       Date:  2019-01-24       Impact factor: 5.486

8.  Population pharmacokinetic analysis of danvatirsen supporting flat dosing switch.

Authors:  Hongmei Xu; Xiao Tong; Ganesh Mugundu; Martin L Scott; Carl Cook; Cecilia Arfvidsson; Elizabeth Pease; Diansong Zhou; Paul Lyne; Nidal Al-Huniti
Journal:  J Pharmacokinet Pharmacodyn       Date:  2019-01-19       Impact factor: 2.745

9.  Dmpk gene deletion or antisense knockdown does not compromise cardiac or skeletal muscle function in mice.

Authors:  Samuel T Carrell; Ellie M Carrell; David Auerbach; Sanjay K Pandey; C Frank Bennett; Robert T Dirksen; Charles A Thornton
Journal:  Hum Mol Genet       Date:  2016-08-13       Impact factor: 6.150

10.  Novel Targeted Therapy for Precursor B Cell Acute Lymphoblastic Leukemia: anti-CD22 Antibody-MXD3 Antisense Oligonucleotide Conjugate.

Authors:  Noriko Satake; Connie Duong; Sakiko Yoshida; Michael Oestergaard; Cathy Chen; Rachael Peralta; Shuling Guo; Punit P Seth; Yueju Li; Laurel Beckett; Jong Chung; Jan Nolta; Nitin Nitin; Joseph M Tuscano
Journal:  Mol Med       Date:  2016-07-22       Impact factor: 6.354

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