Literature DB >> 19084613

Bayesian clustering of flow cytometry data for the diagnosis of B-chronic lymphocytic leukemia.

John Lakoumentas1, John Drakos, Marina Karakantza, George C Nikiforidis, George C Sakellaropoulos.   

Abstract

In the rapidly advancing field of flow cytometry, methodologies facilitating automated clinical decision support are increasingly needed. In the case of B-chronic lymphocytic leukemia (B-CLL), discrimination of the various subpopulations of blood cells is an important task. In this work, our objective is to provide a useful paradigm of computer-based assistance in the domain of flow-cytometric data analysis by proposing a Bayesian methodology for flow cytometry clustering. Using Bayesian clustering, we replicate a series of (unsupervised) data clustering tasks, usually performed manually by the expert. The proposed methodology is able to incorporate the expert's knowledge, as prior information to data-driven statistical learning methods, in a simple and efficient way. We observe almost optimal clustering results, with respect to the expert's gold standard. The model is flexible enough to identify correctly non canonical clustering structures, despite the presence of various abnormalities and heterogeneities in data; it offers an advantage over other types of approaches that apply hierarchical or distance-based concepts.

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Year:  2008        PMID: 19084613     DOI: 10.1016/j.jbi.2008.11.003

Source DB:  PubMed          Journal:  J Biomed Inform        ISSN: 1532-0464            Impact factor:   6.317


  5 in total

1.  Automatic B cell lymphoma detection using flow cytometry data.

Authors:  Ming-Chih Shih; Shou-Hsuan Stephen Huang; Rachel Donohue; Chung-Che Chang; Youli Zu
Journal:  BMC Genomics       Date:  2013-11-05       Impact factor: 3.969

2.  SWIFT-scalable clustering for automated identification of rare cell populations in large, high-dimensional flow cytometry datasets, part 2: biological evaluation.

Authors:  Tim R Mosmann; Iftekhar Naim; Jonathan Rebhahn; Suprakash Datta; James S Cavenaugh; Jason M Weaver; Gaurav Sharma
Journal:  Cytometry A       Date:  2014-02-14       Impact factor: 4.355

Review 3.  Artificial Intelligence and Digital Microscopy Applications in Diagnostic Hematopathology.

Authors:  Hanadi El Achi; Joseph D Khoury
Journal:  Cancers (Basel)       Date:  2020-03-26       Impact factor: 6.639

4.  Dynamic Bayesian networks for prediction of health status and treatment effect in patients with chronic lymphocytic leukemia.

Authors:  Piotr Ladyzynski; Maria Molik; Piotr Foltynski
Journal:  Sci Rep       Date:  2022-02-02       Impact factor: 4.379

Review 5.  How artificial intelligence might disrupt diagnostics in hematology in the near future.

Authors:  Wencke Walter; Claudia Haferlach; Niroshan Nadarajah; Ines Schmidts; Constanze Kühn; Wolfgang Kern; Torsten Haferlach
Journal:  Oncogene       Date:  2021-06-08       Impact factor: 9.867

  5 in total

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