Literature DB >> 19082166

Pyrophosphate-induced reorganization of a reporter-receptor assembly via boronate esterification; a new strategy for the turn-on fluorescent detection of multi-phosphates in aqueous solution.

Aiko Nonaka1, Shoichi Horie, Tony D James, Yuji Kubo.   

Abstract

A new strategy for the fluorescent detection of multi-phosphates in aqueous solution is presented here. Zn(II)-DPA(DPA = dipicolylamine)-appended phenylboronic acid 1 x Zn forms an assembly with alizarin dye in MeOH-10 mM HEPES (1:1 v/v) containing 10 mM NaCl at pH 7.4 at 25 degrees C, in which the dye binds favorably to the coordinated zinc(II) in the Zn(II)-DPA moiety. Addition of pyrophosphate (PPi) as a putative analyte causes reorganization of the complex to produce an alternative boronate ester assembly, which causes an increase in fluorescence, detectable by the naked eye. It is interesting to note that the system exhibited PPi-selectivity over other phosphates such as ATP (adenosine 5'-triphosphate), ADP (adenosine 5'-diphosphate), AMP (adenosine 5'-monophosphate) and Pi (inorganic phosphate); the competitive assay employed to determine the apparent association constants of 1 x Zn with the anion analytes allows us to estimate that the binding with PPi [(1.6 +/- 0.04) x 10(6) M(-1)], is 10-fold and 84-fold higher than with ATP and ADP, respectively. The sensing mechanism of 1 x Zn in the presence of alizarin dye is explored using pH titrations and structural information is obtained using NMR.

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Year:  2008        PMID: 19082166     DOI: 10.1039/b808027e

Source DB:  PubMed          Journal:  Org Biomol Chem        ISSN: 1477-0520            Impact factor:   3.876


  4 in total

Review 1.  Molecular recognition with boronic acids-applications in chemical biology.

Authors:  Gillian F Whyte; Ramon Vilar; Rudiger Woscholski
Journal:  J Chem Biol       Date:  2013-06-01

Review 2.  Self and directed assembly: people and molecules.

Authors:  Tony D James
Journal:  Beilstein J Org Chem       Date:  2016-03-01       Impact factor: 2.883

3.  Mathematical Modeling of a Supramolecular Assembly for Pyrophosphate Sensing.

Authors:  Fereshteh Emami; Hamid Abdollahi; Tsyuoshi Minami; Ben Peco; Sean Reliford
Journal:  Front Chem       Date:  2021-12-21       Impact factor: 5.221

4.  Design, synthesis and evaluation of a tripodal receptor for phosphatidylinositol phosphates.

Authors:  Katharina Reeh; Peter A Summers; Ian R Gould; Rudiger Woscholski; Ramon Vilar
Journal:  Sci Rep       Date:  2020-10-28       Impact factor: 4.379

  4 in total

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