Literature DB >> 24432132

Molecular recognition with boronic acids-applications in chemical biology.

Gillian F Whyte1, Ramon Vilar1, Rudiger Woscholski1.   

Abstract

Small molecules have long been used for the selective recognition of a wide range of analytes. The ability of these chemical receptors to recognise and bind to specific targets mimics certain biological processes (such as protein-substrate interactions) and has therefore attracted recent interest. Due to the abundance of biological molecules possessing polyhydroxy motifs, boronic acids-which form five-membered boronate esters with diols-have become increasingly popular in the synthesis of small chemical receptors. Their targets include biological materials and natural products including phosphatidylinositol bisphosphate, saccharides and polysaccharides, nucleic acids, metal ions and the neurotransmitter dopamine. This review will focus on the many ways in which small chemical receptors based on boronic acids have been used as biochemical tools for various purposes, including sensing and detection of analytes, interference in signalling pathways, enzyme inhibition and cell delivery systems. The most recent developments in each area will be highlighted.

Entities:  

Keywords:  Boronic acids; Chemical receptors; Molecular recognition; cis-Diols

Year:  2013        PMID: 24432132      PMCID: PMC3787204          DOI: 10.1007/s12154-013-0099-0

Source DB:  PubMed          Journal:  J Chem Biol        ISSN: 1864-6158


  75 in total

1.  Recognition of phospho sugars and nucleotides with an array of boronic acid appended bipyridinium salts.

Authors:  Alexander Schiller; Boaz Vilozny; Ritchie A Wessling; Bakthan Singaram
Journal:  Anal Chim Acta       Date:  2008-08-23       Impact factor: 6.558

2.  A colorimetric pH indicators and boronic acids ensemble array for quantitative sugar analysis.

Authors:  Krishna Kanta Ghosh; Eunice Yap; Hanjo Kim; Jun-Seok Lee; Young-Tae Chang
Journal:  Chem Commun (Camb)       Date:  2011-02-17       Impact factor: 6.222

3.  Improving the membrane permeability of sialic acid derivatives.

Authors:  Timothy M Altamore; Peter J Duggan; Guy Y Krippner
Journal:  Bioorg Med Chem       Date:  2005-10-07       Impact factor: 3.641

4.  Human metabolism of the proteasome inhibitor bortezomib: identification of circulating metabolites.

Authors:  Teresa Pekol; J Scott Daniels; Jason Labutti; Ian Parsons; Darrell Nix; Elizabeth Baronas; Frank Hsieh; Liang-Shang Gan; Gerald Miwa
Journal:  Drug Metab Dispos       Date:  2005-03-11       Impact factor: 3.922

5.  Oxidative deboronation of the peptide boronic acid proteasome inhibitor bortezomib: contributions from reactive oxygen species in this novel cytochrome P450 reaction.

Authors:  Jason Labutti; Ian Parsons; Ron Huang; Gerald Miwa; Liang-Shang Gan; J Scott Daniels
Journal:  Chem Res Toxicol       Date:  2006-04       Impact factor: 3.739

6.  3-Methoxycarbonyl-5-nitrophenyl boronic acid: high affinity diol recognition at neutral pH.

Authors:  Hormuzd R Mulla; Nicholas J Agard; Amit Basu
Journal:  Bioorg Med Chem Lett       Date:  2004-01-05       Impact factor: 2.823

7.  Pattern-based recognition for the rapid determination of identity, concentration, and enantiomeric excess of subtly different threo diols.

Authors:  Shagufta H Shabbir; Leo A Joyce; Gabriella M da Cruz; Vincent M Lynch; Steven Sorey; Eric V Anslyn
Journal:  J Am Chem Soc       Date:  2009-09-16       Impact factor: 15.419

8.  Benzoboroxoles as efficient glycopyranoside-binding agents in physiological conditions: structure and selectivity of complex formation.

Authors:  Marie Bérubé; Meenakshi Dowlut; Dennis G Hall
Journal:  J Org Chem       Date:  2008-06-13       Impact factor: 4.354

9.  An antifungal agent inhibits an aminoacyl-tRNA synthetase by trapping tRNA in the editing site.

Authors:  Fernando L Rock; Weimin Mao; Anya Yaremchuk; Mikhail Tukalo; Thibaut Crépin; Huchen Zhou; Yong-Kang Zhang; Vincent Hernandez; Tsutomu Akama; Stephen J Baker; Jacob J Plattner; Lucy Shapiro; Susan A Martinis; Stephen J Benkovic; Stephen Cusack; M R K Alley
Journal:  Science       Date:  2007-06-22       Impact factor: 47.728

10.  An introduction to boron: history, sources, uses, and chemistry.

Authors:  W G Woods
Journal:  Environ Health Perspect       Date:  1994-11       Impact factor: 9.031

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  16 in total

1.  Borylated oximes: versatile building blocks for organic synthesis.

Authors:  Sean K Liew; Aleksandra Holownia; Diego B Diaz; Philip A Cistrone; Philip E Dawson; Andrei K Yudin
Journal:  Chem Commun (Camb)       Date:  2017-09-29       Impact factor: 6.222

2.  Synthesis of 5-Dihydroxyboryluridine Phosphoramidite and Its Site-Specific Incorporation into Oligonucleotides for Probing Thymine DNA Glycosylase.

Authors:  Sam Kavoosi; Debasis Dey; Kabirul Islam
Journal:  Org Lett       Date:  2019-08-26       Impact factor: 6.005

3.  Stilbene Boronic Acids Form a Covalent Bond with Human Transthyretin and Inhibit Its Aggregation.

Authors:  Thomas P Smith; Ian W Windsor; Katrina T Forest; Ronald T Raines
Journal:  J Med Chem       Date:  2017-09-18       Impact factor: 7.446

4.  Electrochemical quantification of Ag2S quantum dots: evaluation of different surface coating ligands for bacteria determination.

Authors:  Olaya Amor-Gutiérrez; Alba Iglesias-Mayor; Pablo Llano-Suárez; José M Costa-Fernández; Ana Soldado; Ana Podadera; Francisco Parra; Agustín Costa-García; Alfredo de la Escosura-Muñiz
Journal:  Mikrochim Acta       Date:  2020-02-14       Impact factor: 5.833

Review 5.  Redox Signaling by Reactive Electrophiles and Oxidants.

Authors:  Saba Parvez; Marcus J C Long; Jesse R Poganik; Yimon Aye
Journal:  Chem Rev       Date:  2018-08-27       Impact factor: 60.622

6.  Synthesis, Reactivity, Functionalization, and ADMET Properties of Silicon-Containing Nitrogen Heterocycles.

Authors:  Scott J Barraza; Scott E Denmark
Journal:  J Am Chem Soc       Date:  2018-05-15       Impact factor: 15.419

7.  Boronic acids for sensing and other applications - a mini-review of papers published in 2013.

Authors:  Karel Lacina; Petr Skládal; Tony D James
Journal:  Chem Cent J       Date:  2014-10-18       Impact factor: 4.215

8.  Visible-Light-Mediated Decarboxylative Radical Additions to Vinyl Boronic Esters: Rapid Access to γ-Amino Boronic Esters.

Authors:  Adam Noble; Riccardo S Mega; Daniel Pflästerer; Eddie L Myers; Varinder K Aggarwal
Journal:  Angew Chem Int Ed Engl       Date:  2018-01-26       Impact factor: 15.336

9.  Click-Particle Display for Base-Modified Aptamer Discovery.

Authors:  Chelsea K L Gordon; Diana Wu; Anusha Pusuluri; Trevor A Feagin; Andrew T Csordas; Michael S Eisenstein; Craig J Hawker; Jia Niu; Hyongsok Tom Soh
Journal:  ACS Chem Biol       Date:  2019-10-12       Impact factor: 5.100

10.  Design, synthesis and evaluation of a tripodal receptor for phosphatidylinositol phosphates.

Authors:  Katharina Reeh; Peter A Summers; Ian R Gould; Rudiger Woscholski; Ramon Vilar
Journal:  Sci Rep       Date:  2020-10-28       Impact factor: 4.379

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