Literature DB >> 19082136

Recent developments in environmental metabolomics.

Mark R Viant1.   

Abstract

Metabolomics is increasingly being used to characterise the interactions of organisms with their natural environment. This article describes the latest developments in this vibrant field. The first section highlights environmental studies that are exploiting recent technological advances in metabolomics, including developments in NMR spectroscopy and mass spectrometry, with a particular focus on toxicity testing in ecological risk assessment. Subsequently, recent laboratory studies of organism function and metabolic responses to stress are reviewed, including investigations of cold, heat and anoxic stress. The importance of model organisms and systems biology within environmental metabolomics is then highlighted. Finally, the first applications of metabolomics to actual field investigations are discussed, with a particular focus on environmental monitoring. During the past year, environmental metabolomics research has been conducted on more than 20 model and non-model species, including eight freshwater and marine fish, nine species of aquatic and terrestrial invertebrates, as well as plants and microbes, demonstrating the rapid growth of this field.

Entities:  

Mesh:

Year:  2008        PMID: 19082136     DOI: 10.1039/b805354e

Source DB:  PubMed          Journal:  Mol Biosyst        ISSN: 1742-2051


  28 in total

1.  Earthworm metabolomic responses after exposure to aged PCB contaminated soils.

Authors:  Melissa Whitfield Åslund; Myrna J Simpson; André J Simpson; Barbara A Zeeb; Allison Rutter
Journal:  Ecotoxicology       Date:  2012-05-24       Impact factor: 2.823

2.  Use of high-resolution metabolomics for the identification of metabolic signals associated with traffic-related air pollution.

Authors:  Donghai Liang; Jennifer L Moutinho; Rachel Golan; Tianwei Yu; Chandresh N Ladva; Megan Niedzwiecki; Douglas I Walker; Stefanie Ebelt Sarnat; Howard H Chang; Roby Greenwald; Dean P Jones; Armistead G Russell; Jeremy A Sarnat
Journal:  Environ Int       Date:  2018-08-07       Impact factor: 9.621

3.  Detection of Natural Products and Their Producers in Ocean Sediments.

Authors:  Robert N Tuttle; Alyssa M Demko; Nastassia V Patin; Clifford A Kapono; Mohamed S Donia; Pieter Dorrestein; Paul R Jensen
Journal:  Appl Environ Microbiol       Date:  2019-04-04       Impact factor: 4.792

Review 4.  Advances in NMR-based biofluid analysis and metabolite profiling.

Authors:  Shucha Zhang; G A Nagana Gowda; Tao Ye; Daniel Raftery
Journal:  Analyst       Date:  2010-04-09       Impact factor: 4.616

5.  Metabolomics unravel contrasting effects of biodiversity on the performance of individual plant species.

Authors:  Christian Scherling; Christiane Roscher; Patrick Giavalisco; Ernst-Detlef Schulze; Wolfram Weckwerth
Journal:  PLoS One       Date:  2010-09-07       Impact factor: 3.240

6.  1H NMR metabolomics of earthworm responses to polychlorinated biphenyl (PCB) exposure in soil.

Authors:  Melissa L Whitfield Åslund; André J Simpson; Myrna J Simpson
Journal:  Ecotoxicology       Date:  2011-03-19       Impact factor: 2.823

Review 7.  Modeling microbial community structure and functional diversity across time and space.

Authors:  Peter E Larsen; Sean M Gibbons; Jack A Gilbert
Journal:  FEMS Microbiol Lett       Date:  2012-05-28       Impact factor: 2.742

8.  Structural characterization of plasma metabolites detected via LC-electrochemical coulometric array using LC-UV fractionation, MS, and NMR.

Authors:  Susan S Bird; Diane P Sheldon; Rose M Gathungu; Paul Vouros; Roger Kautz; Wayne R Matson; Bruce S Kristal
Journal:  Anal Chem       Date:  2012-11-06       Impact factor: 6.986

9.  Freeze tolerance and the underlying metabolite responses in the Xizang plateau frog, Nanorana parkeri.

Authors:  Yonggang Niu; Wangjie Cao; Jinzhou Wang; Jie He; Kenneth B Storey; Li Ding; Xiaolong Tang; Qiang Chen
Journal:  J Comp Physiol B       Date:  2020-10-06       Impact factor: 2.200

10.  Hepatic metabolite profiling of polychlorinated biphenyl (PCB)-resistant and sensitive populations of Atlantic killifish (Fundulus heteroclitus).

Authors:  Lilah Glazer; Melissa C Kido Soule; Krista Longnecker; Elizabeth B Kujawinski; Neelakanteswar Aluru
Journal:  Aquat Toxicol       Date:  2018-10-16       Impact factor: 4.964

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