Literature DB >> 19081671

Cancer driver mutations in protein kinase genes.

Ali Torkamani1, Gennady Verkhivker, Nicholas J Schork.   

Abstract

Recent studies investigating the genetic determinants of cancer suggest that some of the genetic alterations contributing to tumorigenesis may be inherited, but the vast majority is somatically acquired during the transition of a normal cell to a cancer cell. A systematic understanding of the genetic and molecular determinants of cancers has already begun to have a transformative effect on the study and treatment of cancer, particularly through the identification of a range of genetic alterations in protein kinase genes, which are highly associated with the disease. Since kinases are prominent therapeutic targets for intervention within the cancer cell, studying the impact that genomic alterations within them have on cancer initiation, progression, and treatment is both logical and timely. In fact, recent sequencing and resequencing (i.e., polymorphism identification) efforts have catalyzed the quest for protein kinase 'driver' mutations (i.e., those genetic alterations which contribute to the transformation of a normal cell to a proliferating cancerous cell) in distinction to kinase 'passenger' mutations which reflect mutations that merely build up in course of normal and unchecked (i.e., cancerous) somatic cell replication and proliferation. In this review, we discuss the recent progress in the discovery and functional characterization of protein kinase cancer driver mutations and the implications of this progress for understanding tumorigenesis as well as the design of 'personalized' cancer therapeutics that target an individual's unique mutational profile.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 19081671      PMCID: PMC2905872          DOI: 10.1016/j.canlet.2008.11.008

Source DB:  PubMed          Journal:  Cancer Lett        ISSN: 0304-3835            Impact factor:   8.679


  132 in total

Review 1.  The protein kinase complement of the human genome.

Authors:  G Manning; D B Whyte; R Martinez; T Hunter; S Sudarsanam
Journal:  Science       Date:  2002-12-06       Impact factor: 47.728

2.  Mutational analysis of the tyrosine kinome in colorectal cancers.

Authors:  Alberto Bardelli; D Williams Parsons; Natalie Silliman; Janine Ptak; Steve Szabo; Saurabh Saha; Sanford Markowitz; James K V Willson; Giovanni Parmigiani; Kenneth W Kinzler; Bert Vogelstein; Victor E Velculescu
Journal:  Science       Date:  2003-05-09       Impact factor: 47.728

Review 3.  Approaches to comparative sequence analysis: towards a functional view of vertebrate genomes.

Authors:  Elliott H Margulies; Ewan Birney
Journal:  Nat Rev Genet       Date:  2008-04       Impact factor: 53.242

4.  The T790M mutation in EGFR kinase causes drug resistance by increasing the affinity for ATP.

Authors:  Cai-Hong Yun; Kristen E Mengwasser; Angela V Toms; Michele S Woo; Heidi Greulich; Kwok-Kin Wong; Matthew Meyerson; Michael J Eck
Journal:  Proc Natl Acad Sci U S A       Date:  2008-01-28       Impact factor: 11.205

5.  Constitutively active mutant D816VKit induces megakayocyte and mast cell differentiation of early haemopoietic cells from murine foetal liver.

Authors:  Petranel T Ferrao; Thomas J Gonda; Leonie K Ashman
Journal:  Leuk Res       Date:  2003-06       Impact factor: 3.156

Review 6.  Imatinib mesylate in the treatment of chronic myeloid leukaemia.

Authors:  Brian J Druker
Journal:  Expert Opin Pharmacother       Date:  2003-06       Impact factor: 3.889

7.  Oligonucleotide microarrays demonstrate the highest frequency of ATM mutations in the mantle cell subtype of lymphoma.

Authors:  Nicole Y Fang; Timothy C Greiner; Dennis D Weisenburger; Wing C Chan; Julie M Vose; Lynette M Smith; James O Armitage; R Aeryn Mayer; Brian L Pike; Francis S Collins; Joseph G Hacia
Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-15       Impact factor: 11.205

8.  Prediction of cancer driver mutations in protein kinases.

Authors:  Ali Torkamani; Nicholas J Schork
Journal:  Cancer Res       Date:  2008-03-15       Impact factor: 12.701

9.  Mutually exclusive NRASQ61R and BRAFV600E mutations at the single-cell level in the same human melanoma.

Authors:  M Sensi; G Nicolini; C Petti; I Bersani; F Lozupone; A Molla; C Vegetti; D Nonaka; R Mortarini; G Parmiani; S Fais; A Anichini
Journal:  Oncogene       Date:  2006-02-06       Impact factor: 9.867

Review 10.  Structure and clinical relevance of the epidermal growth factor receptor in human cancer.

Authors:  Amit Kumar; Edward T Petri; Balazs Halmos; Titus J Boggon
Journal:  J Clin Oncol       Date:  2008-04-01       Impact factor: 44.544

View more
  39 in total

Review 1.  Tumour molecular profiling for deciding therapy-the French initiative.

Authors:  Frédérique Nowak; Jean-Charles Soria; Fabien Calvo
Journal:  Nat Rev Clin Oncol       Date:  2012-07-10       Impact factor: 66.675

2.  The (un)targeted cancer kinome.

Authors:  Oleg Fedorov; Susanne Müller; Stefan Knapp
Journal:  Nat Chem Biol       Date:  2010-03       Impact factor: 15.040

3.  Identifying Candidate Druggable Targets in Canine Cancer Cell Lines Using Whole-Exome Sequencing.

Authors:  Sunetra Das; Rupa Idate; Kathryn E Cronise; Daniel L Gustafson; Dawn L Duval
Journal:  Mol Cancer Ther       Date:  2019-06-07       Impact factor: 6.261

4.  A meta-analysis of somatic mutations from next generation sequencing of 241 melanomas: a road map for the study of genes with potential clinical relevance.

Authors:  Junfeng Xia; Peilin Jia; Katherine E Hutchinson; Kimberly B Dahlman; Douglas Johnson; Jeffrey Sosman; William Pao; Zhongming Zhao
Journal:  Mol Cancer Ther       Date:  2014-04-22       Impact factor: 6.261

Review 5.  Targeting cancer with kinase inhibitors.

Authors:  Stefan Gross; Rami Rahal; Nicolas Stransky; Christoph Lengauer; Klaus P Hoeflich
Journal:  J Clin Invest       Date:  2015-05-01       Impact factor: 14.808

Review 6.  Kinase mutations in human disease: interpreting genotype-phenotype relationships.

Authors:  Piya Lahiry; Ali Torkamani; Nicholas J Schork; Robert A Hegele
Journal:  Nat Rev Genet       Date:  2010-01       Impact factor: 53.242

Review 7.  Receptor tyrosine kinase mutations in developmental syndromes and cancer: two sides of the same coin.

Authors:  Laura M McDonell; Kristin D Kernohan; Kym M Boycott; Sarah L Sawyer
Journal:  Hum Mol Genet       Date:  2015-07-07       Impact factor: 6.150

8.  Genome-wide gene copy number and expression analysis of primary gastric tumors and gastric cancer cell lines.

Authors:  Siina Junnila; Arto Kokkola; Marja-Liisa Karjalainen-Lindsberg; Pauli Puolakkainen; Outi Monni
Journal:  BMC Cancer       Date:  2010-03-01       Impact factor: 4.430

9.  Sequence and structure signatures of cancer mutation hotspots in protein kinases.

Authors:  Anshuman Dixit; Lin Yi; Ragul Gowthaman; Ali Torkamani; Nicholas J Schork; Gennady M Verkhivker
Journal:  PLoS One       Date:  2009-10-16       Impact factor: 3.240

10.  Hierarchical modeling of activation mechanisms in the ABL and EGFR kinase domains: thermodynamic and mechanistic catalysts of kinase activation by cancer mutations.

Authors:  Anshuman Dixit; Gennady M Verkhivker
Journal:  PLoS Comput Biol       Date:  2009-08-28       Impact factor: 4.475

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.