Literature DB >> 19078965

General RNA-binding proteins have a function in poly(A)-binding protein-dependent translation.

Yuri V Svitkin1, Valentina M Evdokimova, Ann Brasey, Tatyana V Pestova, Daniel Fantus, Akiko Yanagiya, Hiroaki Imataka, Maxim A Skabkin, Lev P Ovchinnikov, William C Merrick, Nahum Sonenberg.   

Abstract

The interaction between the poly(A)-binding protein (PABP) and eukaryotic translational initiation factor 4G (eIF4G), which brings about circularization of the mRNA, stimulates translation. General RNA-binding proteins affect translation, but their role in mRNA circularization has not been studied before. Here, we demonstrate that the major mRNA ribonucleoprotein YB-1 has a pivotal function in the regulation of eIF4F activity by PABP. In cell extracts, the addition of YB-1 exacerbated the inhibition of 80S ribosome initiation complex formation by PABP depletion. Rabbit reticulocyte lysate in which PABP weakly stimulates translation is rendered PABP-dependent after the addition of YB-1. In this system, eIF4E binding to the cap structure is inhibited by YB-1 and stimulated by a nonspecific RNA. Significantly, adding PABP back to the depleted lysate stimulated eIF4E binding to the cap structure more potently if this binding had been downregulated by YB-1. Conversely, adding nonspecific RNA abrogated PABP stimulation of eIF4E binding. These data strongly suggest that competition between YB-1 and eIF4G for mRNA binding is required for efficient stimulation of eIF4F activity by PABP.

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Year:  2008        PMID: 19078965      PMCID: PMC2633083          DOI: 10.1038/emboj.2008.259

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  55 in total

Review 1.  The pleiotropic functions of the Y-box-binding protein, YB-1.

Authors:  Kimitoshi Kohno; Hiroto Izumi; Takeshi Uchiumi; Megumi Ashizuka; Michihiko Kuwano
Journal:  Bioessays       Date:  2003-07       Impact factor: 4.345

Review 2.  Cap-dependent and cap-independent translation in eukaryotic systems.

Authors:  William C Merrick
Journal:  Gene       Date:  2004-05-12       Impact factor: 3.688

3.  Structural organization of mRNA complexes with major core mRNP protein YB-1.

Authors:  Maxim A Skabkin; Olga I Kiselyova; Konstantin G Chernov; Alexey V Sorokin; Evgeniy V Dubrovin; Igor V Yaminsky; Victor D Vasiliev; Lev P Ovchinnikov
Journal:  Nucleic Acids Res       Date:  2004-10-19       Impact factor: 16.971

4.  Translational recognition of the 5'-terminal 7-methylguanosine of globin messenger RNA as a function of ionic strength.

Authors:  L Y Chu; R E Rhoads
Journal:  Biochemistry       Date:  1978-06-13       Impact factor: 3.162

5.  Protein tightly bound to globin mRNA.

Authors:  G Blobel
Journal:  Biochem Biophys Res Commun       Date:  1972-04-14       Impact factor: 3.575

6.  Enhancement of IRES-mediated translation of the c-myc and BiP mRNAs by the poly(A) tail is independent of intact eIF4G and PABP.

Authors:  Christian Thoma; Giovanna Bergamini; Bruno Galy; Patrick Hundsdoerfer; Matthias W Hentze
Journal:  Mol Cell       Date:  2004-09-24       Impact factor: 17.970

7.  Relative importance of 7-methylguanosine in ribosome binding and translation of vesicular stomatitis virus mRNA in wheat germ and reticulocyte cell-free systems.

Authors:  H F Lodish; J K Rose
Journal:  J Biol Chem       Date:  1977-02-25       Impact factor: 5.157

8.  An efficient system for cap- and poly(A)-dependent translation in vitro.

Authors:  Yuri V Svitkin; Nahum Sonenberg
Journal:  Methods Mol Biol       Date:  2004

9.  Reovirus mRNA can be covalently crosslinked via the 5' cap to proteins in initiation complexes.

Authors:  N Sonenberg; A J Shatkin
Journal:  Proc Natl Acad Sci U S A       Date:  1977-10       Impact factor: 11.205

10.  Y box-binding protein 1 induces resistance to oncogenic transformation by the phosphatidylinositol 3-kinase pathway.

Authors:  Andreas G Bader; Katherine A Felts; Ning Jiang; Hwai Wen Chang; Peter K Vogt
Journal:  Proc Natl Acad Sci U S A       Date:  2003-10-06       Impact factor: 11.205

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  38 in total

Review 1.  A mechanistic overview of translation initiation in eukaryotes.

Authors:  Colin Echeverría Aitken; Jon R Lorsch
Journal:  Nat Struct Mol Biol       Date:  2012-06-05       Impact factor: 15.369

2.  Multiple elements in the eIF4G1 N-terminus promote assembly of eIF4G1•PABP mRNPs in vivo.

Authors:  Eun-Hee Park; Sarah E Walker; Joseph M Lee; Stefan Rothenburg; Jon R Lorsch; Alan G Hinnebusch
Journal:  EMBO J       Date:  2010-12-07       Impact factor: 11.598

Review 3.  The role of the poly(A) binding protein in the assembly of the Cap-binding complex during translation initiation in plants.

Authors:  Daniel R Gallie
Journal:  Translation (Austin)       Date:  2014-10-30

Review 4.  Lighting up single-mRNA translation dynamics in living cells.

Authors:  Charlotte A Cialek; Amanda L Koch; Gabriel Galindo; Timothy J Stasevich
Journal:  Curr Opin Genet Dev       Date:  2020-05-11       Impact factor: 5.578

5.  The poly(A)-binding protein partner Paip2a controls translation during late spermiogenesis in mice.

Authors:  Akiko Yanagiya; Geraldine Delbes; Yuri V Svitkin; Bernard Robaire; Nahum Sonenberg
Journal:  J Clin Invest       Date:  2010-08-25       Impact factor: 14.808

6.  Cold Shock Proteins Mediate GN with Mesangioproliferation.

Authors:  Cheng Zhu; Eva Sauter; Anja Schreiter; Claudia R C van Roeyen; Tammo Ostendorf; Jürgen Floege; Florian Gembardt; Christian P Hugo; Berend Isermann; Jonathan A Lindquist; Peter R Mertens
Journal:  J Am Soc Nephrol       Date:  2016-05-05       Impact factor: 10.121

7.  Crystal structure of a Y-box binding protein 1 (YB-1)-RNA complex reveals key features and residues interacting with RNA.

Authors:  Xiao-Juan Yang; Hong Zhu; Shi-Rong Mu; Wen-Juan Wei; Xun Yuan; Meng Wang; Yanchao Liu; Jingyi Hui; Ying Huang
Journal:  J Biol Chem       Date:  2019-06-03       Impact factor: 5.157

Review 8.  Phosphatidylinositol 3-kinase: the oncoprotein.

Authors:  Peter K Vogt; Jonathan R Hart; Marco Gymnopoulos; Hao Jiang; Sohye Kang; Andreas G Bader; Li Zhao; Adam Denley
Journal:  Curr Top Microbiol Immunol       Date:  2010       Impact factor: 4.291

9.  A novel small compound that promotes nuclear translocation of YB-1 ameliorates experimental hepatic fibrosis in mice.

Authors:  Kiyoshi Higashi; Yoshitaka Tomigahara; Hiroaki Shiraki; Kaori Miyata; Toshiyuki Mikami; Toru Kimura; Tadashi Moro; Yutaka Inagaki; Hideo Kaneko
Journal:  J Biol Chem       Date:  2010-11-28       Impact factor: 5.157

10.  Quantifying the dynamics of IRES and cap translation with single-molecule resolution in live cells.

Authors:  Amanda Koch; Luis Aguilera; Tatsuya Morisaki; Brian Munsky; Timothy J Stasevich
Journal:  Nat Struct Mol Biol       Date:  2020-09-21       Impact factor: 15.369

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