Literature DB >> 19078963

Circadian gene expression is resilient to large fluctuations in overall transcription rates.

Charna Dibner1, Daniel Sage, Michael Unser, Christoph Bauer, Thomas d'Eysmond, Felix Naef, Ueli Schibler.   

Abstract

Mammalian circadian oscillators are considered to rely on transcription/translation feedback loops in clock gene expression. The major and essential loop involves the autorepression of cryptochrome (Cry1, Cry2) and period (Per1, Per2) genes. The rhythm-generating circuitry is functional in most cell types, including cultured fibroblasts. Using this system, we show that significant reduction in RNA polymerase II-dependent transcription did not abolish circadian oscillations, but surprisingly accelerated them. A similar period shortening was observed at reduced incubation temperatures in wild-type mouse fibroblasts, but not in cells lacking Per1. Our data suggest that mammalian circadian oscillators are resilient to large fluctuations in general transcription rates and temperature, and that PER1 has an important function in transcription and temperature compensation.

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Year:  2008        PMID: 19078963      PMCID: PMC2634731          DOI: 10.1038/emboj.2008.262

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  66 in total

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Review 3.  Post-translational modifications regulate the ticking of the circadian clock.

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4.  Functional consequences of a CKIdelta mutation causing familial advanced sleep phase syndrome.

Authors:  Ying Xu; Quasar S Padiath; Robert E Shapiro; Christopher R Jones; Susan C Wu; Noriko Saigoh; Kazumasa Saigoh; Louis J Ptácek; Ying-Hui Fu
Journal:  Nature       Date:  2005-03-31       Impact factor: 49.962

5.  A TBP-containing multiprotein complex (TIF-IB) mediates transcription specificity of murine RNA polymerase I.

Authors:  D Eberhard; L Tora; J M Egly; I Grummt
Journal:  Nucleic Acids Res       Date:  1993-09-11       Impact factor: 16.971

6.  Molecular insights into human daily behavior.

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7.  Rhythmic CLOCK-BMAL1 binding to multiple E-box motifs drives circadian Dbp transcription and chromatin transitions.

Authors:  Jürgen A Ripperger; Ueli Schibler
Journal:  Nat Genet       Date:  2006-02-12       Impact factor: 38.330

Review 8.  Interlocked feedback loops of the circadian clock of Neurospora crassa.

Authors:  Michael Brunner; Krisztina Káldi
Journal:  Mol Microbiol       Date:  2008-02-26       Impact factor: 3.501

9.  Inhibition of transcription blocks cell cycle progression of NIH3T3 fibroblasts specifically in G1.

Authors:  S Adolph; S Brüsselbach; R Müller
Journal:  J Cell Sci       Date:  1993-05       Impact factor: 5.285

Review 10.  Finding new clock components: past and future.

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Journal:  J Biol Rhythms       Date:  2004-10       Impact factor: 3.182

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  62 in total

Review 1.  Spotlight on post-transcriptional control in the circadian system.

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Journal:  Cell Mol Life Sci       Date:  2010-08-30       Impact factor: 9.261

2.  Circadian-independent cell mitosis in immortalized fibroblasts.

Authors:  Mijung Yeom; Julie S Pendergast; Yoshihiro Ohmiya; Shin Yamazaki
Journal:  Proc Natl Acad Sci U S A       Date:  2010-05-10       Impact factor: 11.205

3.  Stoichiometric relationship among clock proteins determines robustness of circadian rhythms.

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Journal:  J Biol Chem       Date:  2011-01-03       Impact factor: 5.157

4.  A novel allele of kaiA shortens the circadian period and strengthens interaction of oscillator components in the cyanobacterium Synechococcus elongatus PCC 7942.

Authors:  You Chen; Yong-Ick Kim; Shannon R Mackey; C Kay Holtman; Andy Liwang; Susan S Golden
Journal:  J Bacteriol       Date:  2009-04-24       Impact factor: 3.490

5.  Modeling temperature entrainment of circadian clocks using the Arrhenius equation and a reconstructed model from Chlamydomonas reinhardtii.

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Journal:  J Biol Phys       Date:  2012-03-04       Impact factor: 1.365

Review 6.  Timing the day: what makes bacterial clocks tick?

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Journal:  Nat Rev Microbiol       Date:  2017-02-20       Impact factor: 60.633

Review 7.  Rev-erb-alpha: an integrator of circadian rhythms and metabolism.

Authors:  Hélène Duez; Bart Staels
Journal:  J Appl Physiol (1985)       Date:  2009-08-20

Review 8.  Basis of robustness and resilience in the suprachiasmatic nucleus: individual neurons form nodes in circuits that cycle daily.

Authors:  Matthew P Butler; Rae Silver
Journal:  J Biol Rhythms       Date:  2009-10       Impact factor: 3.182

9.  Autonomous and self-sustained circadian oscillators displayed in human islet cells.

Authors:  P Pulimeno; T Mannic; D Sage; L Giovannoni; P Salmon; S Lemeille; M Giry-Laterriere; M Unser; D Bosco; C Bauer; J Morf; P Halban; J Philippe; C Dibner
Journal:  Diabetologia       Date:  2012-12-15       Impact factor: 10.122

10.  Temperature compensation and temperature sensation in the circadian clock.

Authors:  Philip B Kidd; Michael W Young; Eric D Siggia
Journal:  Proc Natl Acad Sci U S A       Date:  2015-11-02       Impact factor: 11.205

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