Literature DB >> 19066814

Determination of virus abundance by epifluorescence microscopy.

Alice C Ortmann1, Curtis A Suttle.   

Abstract

Determination of virus abundance using epifluorescence microscopy is a rapid and accurate method. The protocol requires the concentration of virus particles by collection on a filter. The nucleic acid in the virus particles is then stained with a fluorescent stain and the sample viewed with an epifluorescence microscope. The method was originally developed to determine the abundance of virus particles in water samples, however the protocol has been adapted for cultures and sediment samples. Although the method provides total counts of all virus-sized particles, regardless of infectivity, the method can be used for rapidly screening samples for further study.

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Year:  2009        PMID: 19066814     DOI: 10.1007/978-1-60327-164-6_10

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  8 in total

1.  Global analysis of viral infection in an archaeal model system.

Authors:  Walid S Maaty; Joseph D Steffens; Joshua Heinemann; Alice C Ortmann; Benjamin D Reeves; Swapan K Biswas; Edward A Dratz; Paul A Grieco; Mark J Young; Brian Bothner
Journal:  Front Microbiol       Date:  2012-12-10       Impact factor: 5.640

2.  A protocol for enumeration of aquatic viruses by epifluorescence microscopy using Anodisc™ 13 membranes.

Authors:  Charles R Budinoff; Star N Loar; Gary R LeCleir; Steven W Wilhelm; Alison Buchan
Journal:  BMC Microbiol       Date:  2011-07-25       Impact factor: 3.605

Review 3.  Assembly of the virome in newborn human infants.

Authors:  Frederic Bushman; Guanxiang Liang
Journal:  Curr Opin Virol       Date:  2021-04-01       Impact factor: 7.121

Review 4.  Virus-like Particles: Measures and Biological Functions.

Authors:  Tara Bhat; Amy Cao; John Yin
Journal:  Viruses       Date:  2022-02-14       Impact factor: 5.048

5.  Contrasting seasonal drivers of virus abundance and production in the North Pacific Ocean.

Authors:  P Jackson Gainer; Helena L Pound; Alyse A Larkin; Gary R LeCleir; Jennifer M DeBruyn; Erik R Zinser; Zackary I Johnson; Steven W Wilhelm
Journal:  PLoS One       Date:  2017-09-07       Impact factor: 3.240

6.  Infection by a Giant Virus (AaV) Induces Widespread Physiological Reprogramming in Aureococcus anophagefferens CCMP1984 - A Harmful Bloom Algae.

Authors:  Mohammad Moniruzzaman; Eric R Gann; Steven W Wilhelm
Journal:  Front Microbiol       Date:  2018-04-19       Impact factor: 5.640

Review 7.  Viral outbreaks detection and surveillance using wastewater-based epidemiology, viral air sampling, and machine learning techniques: A comprehensive review and outlook.

Authors:  Omar M Abdeldayem; Areeg M Dabbish; Mahmoud M Habashy; Mohamed K Mostafa; Mohamed Elhefnawy; Lobna Amin; Eslam G Al-Sakkari; Ahmed Ragab; Eldon R Rene
Journal:  Sci Total Environ       Date:  2021-08-21       Impact factor: 7.963

8.  Microbial etiologies of ventilator-associated pneumonia (VAP) in intensive care unit of Beni-Suef University's Hospital.

Authors:  Al Zahraa M Maebed; Yasser Gaber; Walid Bakeer; Tarek Dishisha
Journal:  Beni Suef Univ J Basic Appl Sci       Date:  2021-07-29
  8 in total

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