Literature DB >> 19047363

Uncoupling of the patterns of chromatin association of different transcription elongation factors by a histone H3 mutant in Saccharomyces cerevisiae.

Amanda Lloyd1, Katie Pratt, Erica Siebrasse, Matthew D Moran, Andrea A Duina.   

Abstract

The transcription elongation complexes yFACT, Spt4/Spt5, and Spt6/Iws1 were previously shown to follow similar patterns of association across transcribed genes in Saccharomyces cerevisiae. Using a histone H3 mutant, we now provide evidence that the mechanism of association of yFACT across genes is separable from that adopted by Spt4/Spt5 and Spt6/Iws1.

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Year:  2008        PMID： 19047363      PMCID： PMC2643603          DOI： 10.1128/EC.00348-08

Source DB:  PubMed          Journal:  Eukaryot Cell        ISSN： 1535-9786


  27 in total

Review 1.  Transcription elongation by RNA polymerase II.

Authors:  Grant A Hartzog
Journal:  Curr Opin Genet Dev       Date:  2003-04       Impact factor: 5.578

2.  FACT facilitates transcription-dependent nucleosome alteration.

Authors:  Rimma Belotserkovskaya; Sangtaek Oh; Vladimir A Bondarenko; George Orphanides; Vasily M Studitsky; Danny Reinberg
Journal:  Science       Date:  2003-08-22       Impact factor: 47.728

Review 3.  Transcript elongation on a nucleoprotein template.

Authors:  Grant A Hartzog; Jennifer L Speer; Derek L Lindstrom
Journal:  Biochim Biophys Acta       Date:  2002-09-13

4.  RNA polymerase II elongation factors of Saccharomyces cerevisiae: a targeted proteomics approach.

Authors:  Nevan J Krogan; Minkyu Kim; Seong Hoon Ahn; Guoqing Zhong; Michael S Kobor; Gerard Cagney; Andrew Emili; Ali Shilatifard; Stephen Buratowski; Jack F Greenblatt
Journal:  Mol Cell Biol       Date:  2002-10       Impact factor: 4.272

5.  Spt16-Pob3 and the HMG protein Nhp6 combine to form the nucleosome-binding factor SPN.

Authors:  T Formosa; P Eriksson; J Wittmeyer; J Ginn; Y Yu; D J Stillman
Journal:  EMBO J       Date:  2001-07-02       Impact factor: 11.598

6.  H2B ubiquitylation plays a role in nucleosome dynamics during transcription elongation.

Authors:  Alastair B Fleming; Cheng-Fu Kao; Cory Hillyer; Michael Pikaart; Mary Ann Osley
Journal:  Mol Cell       Date:  2008-07-11       Impact factor: 17.970

7.  Chromatin remodeling protein Chd1 interacts with transcription elongation factors and localizes to transcribed genes.

Authors:  Rajna Simic; Derek L Lindstrom; Hien G Tran; Kelli L Roinick; Patrick J Costa; Alexander D Johnson; Grant A Hartzog; Karen M Arndt
Journal:  EMBO J       Date:  2003-04-15       Impact factor: 11.598

8.  Transcription elongation factors repress transcription initiation from cryptic sites.

Authors:  Craig D Kaplan; Lisa Laprade; Fred Winston
Journal:  Science       Date:  2003-08-22       Impact factor: 47.728

9.  Analysis of a mutant histone H3 that perturbs the association of Swi/Snf with chromatin.

Authors:  Andrea A Duina; Fred Winston
Journal:  Mol Cell Biol       Date:  2004-01       Impact factor: 4.272

10.  The FACT complex travels with elongating RNA polymerase II and is important for the fidelity of transcriptional initiation in vivo.

Authors:  Paul B Mason; Kevin Struhl
Journal:  Mol Cell Biol       Date:  2003-11       Impact factor: 4.272
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  7 in total

1.  Transcription Promotes the Interaction of the FAcilitates Chromatin Transactions (FACT) Complex with Nucleosomes in Saccharomyces cerevisiae.

Authors:  Benjamin J E Martin; Adam T Chruscicki; LeAnn J Howe
Journal:  Genetics       Date:  2018-09-20       Impact factor: 4.562

2.  The role of FACT in making and breaking nucleosomes.

Authors:  Tim Formosa
Journal:  Biochim Biophys Acta       Date:  2011-07-23

3.  The peptidyl prolyl isomerase Rrd1 regulates the elongation of RNA polymerase II during transcriptional stresses.

Authors:  Jeremie Poschmann; Simon Drouin; Pierre-Etienne Jacques; Karima El Fadili; Michael Newmarch; François Robert; Dindial Ramotar
Journal:  PLoS One       Date:  2011-08-24       Impact factor: 3.240

4.  Mutant versions of the S. cerevisiae transcription elongation factor Spt16 define regions of Spt16 that functionally interact with histone H3.

Authors:  Catherine N Myers; Gary B Berner; Joseph H Holthoff; Kirby Martinez-Fonts; Jennifer A Harper; Sarah Alford; Megan N Taylor; Andrea A Duina
Journal:  PLoS One       Date:  2011-06-06       Impact factor: 3.240

5.  A systematic mutational analysis of a histone H3 residue in budding yeast provides insights into chromatin dynamics.

Authors:  Paige Johnson; Virginia Mitchell; Kelsi McClure; Martha Kellems; Sarah Marshall; Mary K Allison; Harrison Lindley; Hoai-Trang T Nguyen; Jessalyn E Tackett; Andrea A Duina
Journal:  G3 (Bethesda)       Date:  2015-02-23       Impact factor: 3.154

6.  A nucleosomal region important for ensuring proper interactions between the transcription elongation factor Spt16 and transcribed genes in Saccharomyces cerevisiae.

Authors:  Hoai-Trang T Nguyen; William Wharton; Jennifer A Harper; James R Dornhoffer; Andrea A Duina
Journal:  G3 (Bethesda)       Date:  2013-06-21       Impact factor: 3.154

7.  Histone Chaperones Spt6 and FACT: Similarities and Differences in Modes of Action at Transcribed Genes.

Authors:  Andrea A Duina
Journal:  Genet Res Int       Date:  2011-10-26
  7 in total

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