Literature DB >> 19047345

Preferential reduction of the thermodynamically less favorable electron acceptor, sulfate, by a nitrate-reducing strain of the sulfate-reducing bacterium Desulfovibrio desulfuricans 27774.

Angeliki Marietou1, Lesley Griffiths, Jeff Cole.   

Abstract

Desulfovibrio desulfuricans strain 27774 is one of a relative small group of sulfate-reducing bacteria that can also grow with nitrate as an alternative electron acceptor, but how nitrate reduction is regulated in any sulfate-reducing bacterium is controversial. Strain 27774 grew more rapidly and to higher yields of biomass with nitrate than with sulfate or nitrite as the only electron acceptor. In the presence of both sulfate and nitrate, sulfate was used preferentially, even when cultures were continuously gassed with nitrogen and carbon dioxide to prevent sulfide inhibition of nitrate reduction. The napC transcription start site was identified 112 bases upstream of the first base of the translation start codon. Transcripts initiated at the napC promoter that were extended across the napM-napA boundary were detected by reverse transcription-PCR, confirming that the six nap genes can be cotranscribed as a single operon. Real-time PCR experiments confirmed that nap operon expression is regulated at the level of mRNA transcription by at least two mechanisms: nitrate induction and sulfate repression. We speculate that three almost perfect inverted-repeat sequences located upstream of the transcription start site might be binding sites for one or more proteins of the CRP/FNR family of transcription factors that mediate nitrate induction and sulfate repression of nitrate reduction by D. desulfuricans.

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Year:  2008        PMID: 19047345      PMCID: PMC2632061          DOI: 10.1128/JB.01171-08

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  31 in total

1.  Energetic consequences of nitrite stress in Desulfovibrio vulgaris Hildenborough, inferred from global transcriptional analysis.

Authors:  Qiang He; Katherine H Huang; Zhili He; Eric J Alm; Matthew W Fields; Terry C Hazen; Adam P Arkin; Judy D Wall; Jizhong Zhou
Journal:  Appl Environ Microbiol       Date:  2006-06       Impact factor: 4.792

2.  Global analysis of heat shock response in Desulfovibrio vulgaris Hildenborough.

Authors:  S R Chhabra; Q He; K H Huang; S P Gaucher; E J Alm; Z He; M Z Hadi; T C Hazen; J D Wall; J Zhou; A P Arkin; A K Singh
Journal:  J Bacteriol       Date:  2006-03       Impact factor: 3.490

3.  Nitrate Reduction in a Sulfate-Reducing Bacterium, Desulfovibrio desulfuricans, Isolated from Rice Paddy Soil: Sulfide Inhibition, Kinetics, and Regulation.

Authors:  T Dalsgaard; F Bak
Journal:  Appl Environ Microbiol       Date:  1994-01       Impact factor: 4.792

4.  Periplasmic nitrate reductase (NapABC enzyme) supports anaerobic respiration by Escherichia coli K-12.

Authors:  Valley Stewart; Yiran Lu; Andrew J Darwin
Journal:  J Bacteriol       Date:  2002-03       Impact factor: 3.490

Review 5.  Alternative respiratory pathways of Escherichia coli: energetics and transcriptional regulation in response to electron acceptors.

Authors:  G Unden; J Bongaerts
Journal:  Biochim Biophys Acta       Date:  1997-07-04

6.  Global transcriptomic analysis of Desulfovibrio vulgaris on different electron donors.

Authors:  Weiwen Zhang; David E Culley; Johannes C M Scholten; Mike Hogan; Luigi Vitiritti; Fred J Brockman
Journal:  Antonie Van Leeuwenhoek       Date:  2006-05-05       Impact factor: 2.271

7.  Localization of dehydrogenases, reductases, and electron transfer components in the sulfate-reducing bacterium Desulfovibrio gigas.

Authors:  J M Odom; H D Peck
Journal:  J Bacteriol       Date:  1981-07       Impact factor: 3.490

8.  Analysis of a ferric uptake regulator (Fur) mutant of Desulfovibrio vulgaris Hildenborough.

Authors:  Kelly S Bender; Huei-Che Bill Yen; Christopher L Hemme; Zamin Yang; Zhili He; Qiang He; Jizhong Zhou; Katherine H Huang; Eric J Alm; Terry C Hazen; Adam P Arkin; Judy D Wall
Journal:  Appl Environ Microbiol       Date:  2007-07-13       Impact factor: 4.792

9.  Response to culture aeration mediated by the nitrate and nitrite sensor NarQ of Escherichia coli K-12.

Authors:  Valley Stewart; Li-Ling Chen; Hui-chung Wu
Journal:  Mol Microbiol       Date:  2003-11       Impact factor: 3.501

10.  Physiological and gene expression analysis of inhibition of Desulfovibrio vulgaris hildenborough by nitrite.

Authors:  Shelley A Haveman; E Anne Greene; Claire P Stilwell; Johanna K Voordouw; Gerrit Voordouw
Journal:  J Bacteriol       Date:  2004-12       Impact factor: 3.490

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  11 in total

1.  Sulfate-reducing bacterium Desulfovibrio desulfuricans ND132 as a model for understanding bacterial mercury methylation.

Authors:  Cynthia C Gilmour; Dwayne A Elias; Amy M Kucken; Steven D Brown; Anthony V Palumbo; Christopher W Schadt; Judy D Wall
Journal:  Appl Environ Microbiol       Date:  2011-04-22       Impact factor: 4.792

2.  Electron transfer between periplasmic formate dehydrogenase and cytochromes c in Desulfovibrio desulfuricans ATCC 27774.

Authors:  Sofia Marques da Silva; Isabel Pacheco; Inês A Cardoso Pereira
Journal:  J Biol Inorg Chem       Date:  2012-04-21       Impact factor: 3.358

3.  Regulation of Nitrite Stress Response in Desulfovibrio vulgaris Hildenborough, a Model Sulfate-Reducing Bacterium.

Authors:  Lara Rajeev; Amy Chen; Alexey E Kazakov; Eric G Luning; Grant M Zane; Pavel S Novichkov; Judy D Wall; Aindrila Mukhopadhyay
Journal:  J Bacteriol       Date:  2015-08-17       Impact factor: 3.490

Review 4.  Nitrate and periplasmic nitrate reductases.

Authors:  Courtney Sparacino-Watkins; John F Stolz; Partha Basu
Journal:  Chem Soc Rev       Date:  2014-01-21       Impact factor: 54.564

5.  Coordinated response of the Desulfovibrio desulfuricans 27774 transcriptome to nitrate, nitrite and nitric oxide.

Authors:  Ian T Cadby; Matthew Faulkner; Jeanne Cheneby; Justine Long; Jacques van Helden; Alain Dolla; Jeffrey A Cole
Journal:  Sci Rep       Date:  2017-11-24       Impact factor: 4.379

6.  Nitrogen Fertilization and Native C4 Grass Species Alter Abundance, Activity, and Diversity of Soil Diazotrophic Communities.

Authors:  Jialin Hu; Jonathan D Richwine; Patrick D Keyser; Lidong Li; Fei Yao; Sindhu Jagadamma; Jennifer M DeBruyn
Journal:  Front Microbiol       Date:  2021-07-08       Impact factor: 5.640

7.  Gene Expression Correlates with Process Rates Quantified for Sulfate- and Fe(III)-Reducing Bacteria in U(VI)-Contaminated Sediments.

Authors:  Denise M Akob; Sang Hyon Lee; Mili Sheth; Kirsten Küsel; David B Watson; Anthony V Palumbo; Joel E Kostka; Kuk-Jeong Chin
Journal:  Front Microbiol       Date:  2012-08-09       Impact factor: 5.640

8.  Nitrate reduction functional genes and nitrate reduction potentials persist in deeper estuarine sediments. Why?

Authors:  Sokratis Papaspyrou; Cindy J Smith; Liang F Dong; Corinne Whitby; Alex J Dumbrell; David B Nedwell
Journal:  PLoS One       Date:  2014-04-11       Impact factor: 3.240

9.  Inhibition of microbial sulfate reduction in a flow-through column system by (per)chlorate treatment.

Authors:  Anna Engelbrektson; Christopher G Hubbard; Lauren M Tom; Aaron Boussina; Yong T Jin; Hayden Wong; Yvette M Piceno; Hans K Carlson; Mark E Conrad; Gary Anderson; John D Coates
Journal:  Front Microbiol       Date:  2014-06-26       Impact factor: 5.640

10.  Rice Paddy Nitrospirae Carry and Express Genes Related to Sulfate Respiration: Proposal of the New Genus "Candidatus Sulfobium".

Authors:  Sarah Zecchin; Ralf C Mueller; Jana Seifert; Ulrich Stingl; Karthik Anantharaman; Martin von Bergen; Lucia Cavalca; Michael Pester
Journal:  Appl Environ Microbiol       Date:  2018-02-14       Impact factor: 4.792

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