Literature DB >> 19045167

Estimating the rate constant of cyclic GMP hydrolysis by activated phosphodiesterase in photoreceptors.

Jürgen Reingruber1, David Holcman.   

Abstract

The early steps of light response occur in the outer segment of rod and cone photoreceptor. They involve the hydrolysis of cGMP, a soluble cyclic nucleotide, that gates ionic channels located in the outer segment membrane. We shall study here the rate by which cGMP is hydrolyzed by activated phosphodiesterase (PDE). This process has been characterized experimentally by two different rate constants beta(d) and beta(sub): beta(d) accounts for the effect of all spontaneously active PDE in the outer segment, and beta(sub) characterizes cGMP hydrolysis induced by a single light-activated PDE. So far, no attempt has been made to derive the experimental values of beta(d) and beta(sub) from a theoretical model, which is the goal of this work. Using a model of diffusion in the confined rod geometry, we derive analytical expressions for beta(d) and beta(sub) by calculating the flux of cGMP molecules to an activated PDE site. We obtain the dependency of these rate constants as a function of the outer segment geometry, the PDE activation and deactivation rates and the aqueous cGMP diffusion constant. Our formulas show good agreement with experimental measurements. Finally, we use our derivation to model the time course of the cGMP concentration in a transversally well-stirred outer segment.

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Year:  2008        PMID: 19045167     DOI: 10.1063/1.2991174

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  6 in total

1.  Detection of single photons by toad and mouse rods.

Authors:  Jürgen Reingruber; Johan Pahlberg; Michael L Woodruff; Alapakkam P Sampath; Gordon L Fain; David Holcman
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-08       Impact factor: 11.205

2.  How rods respond to single photons: Key adaptations of a G-protein cascade that enable vision at the physical limit of perception.

Authors:  Jürgen Reingruber; David Holcman; Gordon L Fain
Journal:  Bioessays       Date:  2015-09-10       Impact factor: 4.345

3.  Analysis of waveform and amplitude of mouse rod and cone flash responses.

Authors:  Annia Abtout; Gordon Fain; Jürgen Reingruber
Journal:  J Physiol       Date:  2021-06-08       Impact factor: 6.228

Review 4.  cGMP in mouse rods: the spatiotemporal dynamics underlying single photon responses.

Authors:  Owen P Gross; Edward N Pugh; Marie E Burns
Journal:  Front Mol Neurosci       Date:  2015-03-04       Impact factor: 5.639

5.  A quantitative account of mammalian rod phototransduction with PDE6 dimeric activation: responses to bright flashes.

Authors:  Trevor D Lamb; Timothy W Kraft
Journal:  Open Biol       Date:  2020-01-08       Impact factor: 6.411

6.  Functional modulation of phosphodiesterase-6 by calcium in mouse rod photoreceptors.

Authors:  Teemu Turunen; Ari Koskelainen
Journal:  Sci Rep       Date:  2021-04-26       Impact factor: 4.379

  6 in total

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