Literature DB >> 19039353

Intramolecular cyclizations of polyketide biosynthesis: mining for a "Diels-Alderase"?

Wendy L Kelly1.   

Abstract

Despite the large number of naturally occurring metabolites existing for which enzymatic Diels-Alder reactions have been proposed as a key biosynthetic step, the actual number of enzymes thus far identified for these transformations is incredibly low. Even for those few enzymes identified, there is currently little biochemical or mechanistic evidence to support the label of a "Diels-Alderase." For several families of polyketide metabolites, the transformation in question introduces a rigid, cross-linked scaffold, leaving the remaining peripheral modifications and polyketide processing to provide the variation among the related metabolites. A detailed understanding of these modifications--how they are introduced and the tolerance of enzymes involved for alternate substrates--will strengthen biosynthetic engineering efforts toward related designer metabolites. This review addresses intramolecular cyclizations that appear to be consistent with enzymatic Diels-Alder transformations for which either the responsible enzyme has been identified or the respective biosynthetic gene cluster for the metabolite in question has been elucidated.

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Year:  2008        PMID: 19039353     DOI: 10.1039/b814552k

Source DB:  PubMed          Journal:  Org Biomol Chem        ISSN: 1477-0520            Impact factor:   3.876


  30 in total

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2.  Lessons and revelations from biomimetic syntheses.

Authors:  Mina Razzak; Jef K De Brabander
Journal:  Nat Chem Biol       Date:  2011-11-15       Impact factor: 15.040

3.  Computational design of a lipase for catalysis of the Diels-Alder reaction.

Authors:  Mats Linder; Anders Hermansson; John Liebeschuetz; Tore Brinck
Journal:  J Mol Model       Date:  2010-06-24       Impact factor: 1.810

4.  Dynamically Complex [6+4] and [4+2] Cycloadditions in the Biosynthesis of Spinosyn A.

Authors:  Ashay Patel; Zhuo Chen; Zhongyue Yang; Osvaldo Gutiérrez; Hung-wen Liu; K N Houk; Daniel A Singleton
Journal:  J Am Chem Soc       Date:  2016-03-09       Impact factor: 15.419

Review 5.  Natural [4 + 2]-Cyclases.

Authors:  Byung-Sun Jeon; Shao-An Wang; Mark W Ruszczycky; Hung-Wen Liu
Journal:  Chem Rev       Date:  2016-12-01       Impact factor: 60.622

6.  Computational design of a Diels-Alderase from a thermophilic esterase: the importance of dynamics.

Authors:  Mats Linder; Adam Johannes Johansson; Tjelvar S G Olsson; John Liebeschuetz; Tore Brinck
Journal:  J Comput Aided Mol Des       Date:  2012-09-16       Impact factor: 3.686

Review 7.  Current developments and challenges in the search for a naturally selected Diels-Alderase.

Authors:  Hak Joong Kim; Mark W Ruszczycky; Hung-wen Liu
Journal:  Curr Opin Chem Biol       Date:  2012-01-17       Impact factor: 8.822

Review 8.  Thiazolyl peptide antibiotic biosynthesis: a cascade of post-translational modifications on ribosomal nascent proteins.

Authors:  Christopher T Walsh; Michael G Acker; Albert A Bowers
Journal:  J Biol Chem       Date:  2010-06-03       Impact factor: 5.157

Review 9.  The architectures of iterative type I PKS and FAS.

Authors:  Dominik A Herbst; Craig A Townsend; Timm Maier
Journal:  Nat Prod Rep       Date:  2018-10-17       Impact factor: 13.423

10.  Natural Diels-Alderases: Elusive and Irresistable.

Authors:  Kimberly Klas; Sachiko Tsukamoto; David H Sherman; Robert M Williams
Journal:  J Org Chem       Date:  2015-12-04       Impact factor: 4.354

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