Literature DB >> 19027980

GC-biased gene conversion promotes the fixation of deleterious amino acid changes in primates.

Nicolas Galtier1, Laurent Duret, Sylvain Glémin, Vincent Ranwez.   

Abstract

GC-biased gene conversion (gBGC) is a recently discovered, recombination-associated segregation distortion, which influences GC-content dynamics in the mammalian genome. We scanned the primate proteome for examples of exon-specific, lineage-specific accelerated amino acid evolution. Here, we show that such episodes are frequently accompanied by an increase in GC-content, which extends to synonymous and intronic positions. This demonstrates that gBGC has substantially (negatively) impacted the evolutionary trajectory of human proteins by promoting the fixation of deleterious AT-->GC mutations.

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Year:  2008        PMID: 19027980     DOI: 10.1016/j.tig.2008.10.011

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  87 in total

1.  Detecting positive selection within genomes: the problem of biased gene conversion.

Authors:  Abhirami Ratnakumar; Sylvain Mousset; Sylvain Glémin; Jonas Berglund; Nicolas Galtier; Laurent Duret; Matthew T Webster
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-08-27       Impact factor: 6.237

2.  Surprising fitness consequences of GC-biased gene conversion: I. Mutation load and inbreeding depression.

Authors:  Sylvain Glémin
Journal:  Genetics       Date:  2010-04-26       Impact factor: 4.562

3.  Surprising fitness consequences of GC-biased gene conversion. II. Heterosis.

Authors:  Sylvain Glémin
Journal:  Genetics       Date:  2010-10-18       Impact factor: 4.562

4.  A time-invariant principle of genome evolution.

Authors:  Subhajyoti De; M Madan Babu
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-06       Impact factor: 11.205

5.  Evolutionary genomics: A positive becomes a negative.

Authors:  Laurence D Hurst
Journal:  Nature       Date:  2009-01-29       Impact factor: 49.962

Review 6.  How culture shaped the human genome: bringing genetics and the human sciences together.

Authors:  Kevin N Laland; John Odling-Smee; Sean Myles
Journal:  Nat Rev Genet       Date:  2010-02       Impact factor: 53.242

7.  Methods for incorporating the hypermutability of CpG dinucleotides in detecting natural selection operating at the amino acid sequence level.

Authors:  Yoshiyuki Suzuki; Takashi Gojobori; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2009-07-06       Impact factor: 16.240

8.  The expansion of amino-acid repeats is not associated to adaptive evolution in mammalian genes.

Authors:  Fernando Cruz; Julien Roux; Marc Robinson-Rechavi
Journal:  BMC Genomics       Date:  2009-12-18       Impact factor: 3.969

9.  The mechanism of expansion and the volatility it created in three pheromone gene clusters in the mouse (Mus musculus) genome.

Authors:  Robert C Karn; Christina M Laukaitis
Journal:  Genome Biol Evol       Date:  2009-11-20       Impact factor: 3.416

10.  Widespread genomic signatures of natural selection in hominid evolution.

Authors:  Graham McVicker; David Gordon; Colleen Davis; Phil Green
Journal:  PLoS Genet       Date:  2009-05-08       Impact factor: 5.917

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