Literature DB >> 19015544

Reinventing the ames test as a quantitative lab that connects classical and molecular genetics.

Nathan Goodson-Gregg1, Elizabeth A De Stasio.   

Abstract

While many institutions use a version of the Ames test in the undergraduate genetics laboratory, students typically are not exposed to techniques or procedures beyond qualitative analysis of phenotypic reversion, thereby seriously limiting the scope of learning. We have extended the Ames test to include both quantitative analysis of reversion frequency and molecular analysis of revertant gene sequences. By giving students a role in designing their quantitative methods and analyses, students practice and apply quantitative skills. To help students connect classical and molecular genetic concepts and techniques, we report here procedures for characterizing the molecular lesions that confer a revertant phenotype. We suggest undertaking reversion of both missense and frameshift mutants to allow a more sophisticated molecular genetic analysis. These modifications and additions broaden the educational content of the traditional Ames test teaching laboratory, while simultaneously enhancing students' skills in experimental design, quantitative analysis, and data interpretation.

Mesh:

Year:  2008        PMID: 19015544      PMCID: PMC2621171          DOI: 10.1534/genetics.108.095588

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  12 in total

1.  Education. Scientific teaching.

Authors:  Jo Handelsman; Diane Ebert-May; Robert Beichner; Peter Bruns; Amy Chang; Robert DeHaan; Jim Gentile; Sarah Lauffer; James Stewart; Shirley M Tilghman; William B Wood
Journal:  Science       Date:  2004-04-23       Impact factor: 47.728

2.  Teaching statistics in biology: using inquiry-based learning to strengthen understanding of statistical analysis in biology laboratory courses.

Authors:  Anneke M Metz
Journal:  CBE Life Sci Educ       Date:  2008       Impact factor: 3.325

3.  Bioinformatics: Current practice and future challenges for life science education.

Authors:  Catherine Hack; Gary Kendall
Journal:  Biochem Mol Biol Educ       Date:  2005-03       Impact factor: 1.160

4.  Rapid analysis of base-pair substitutions induced by mutagenic drugs through their oxygen radical or epoxide derivatives.

Authors:  A Abu-Shakra; E T McQueen; M L Cunningham
Journal:  Mutat Res       Date:  2000-10-10       Impact factor: 2.433

5.  Rapid selection of nonhotspot mutants among hisD+ revertants of Salmonella typhimurium TA98 in Ames test by peptide nucleic acid (PNA)-mediated PCR clamping.

Authors:  Toshiyuki Takiya; Yoshiaki Horie; Satoshi Futo; Yutaka Matsumoto; Keiichi Kawai; Tohru Suzuki
Journal:  J Biosci Bioeng       Date:  2003       Impact factor: 2.894

6.  Salmonella typhimurium strain TA100 differentiates several classes of carcinogens and mutagens by base substitution specificity.

Authors:  W H Koch; E N Henrikson; E Kupchella; T A Cebula
Journal:  Carcinogenesis       Date:  1994-01       Impact factor: 4.944

Review 7.  Identifying environmental chemicals causing mutations and cancer.

Authors:  B N Ames
Journal:  Science       Date:  1979-05-11       Impact factor: 47.728

8.  Sodium azide mutagenesis: preferential generation of A.T-->G.C transitions in the barley Ant18 gene.

Authors:  O Olsen; X Wang; D von Wettstein
Journal:  Proc Natl Acad Sci U S A       Date:  1993-09-01       Impact factor: 11.205

9.  Complex frameshift mutations mediated by plasmid pKM101: mutational mechanisms deduced from 4-aminobiphenyl-induced mutation spectra in Salmonella.

Authors:  J G Levine; R M Schaaper; D M DeMarini
Journal:  Genetics       Date:  1994-03       Impact factor: 4.562

10.  Using Saccharomyces cerevisiae to test the mutagenicity of household compounds: an open ended hypothesis-driven teaching lab.

Authors:  Pamela A Marshall
Journal:  CBE Life Sci Educ       Date:  2007       Impact factor: 3.325

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  1 in total

1.  Teaching during the COVID-19 Pandemic: Sharing Results and Data Obtained from the Ames Test.

Authors:  Valentina Blanco; Marcos Davyt; Javier García-Alonso; Claudia Piccini; Pablo Zunino; Eliana Rodríguez
Journal:  J Microbiol Biol Educ       Date:  2021-10-29
  1 in total

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