Literature DB >> 19015519

Regulation of zebrafish fin regeneration by microRNAs.

Elizabeth J Thatcher1, Ima Paydar, Kimberly K Anderson, James G Patton.   

Abstract

A number of genes have been implicated in regeneration, but the regulation of these genes, particularly pertaining to regeneration in higher vertebrates, remains an interesting and mostly open question. We have studied microRNA (miRNA) regulation of regeneration and found that an intact miRNA pathway is essential for caudal fin regeneration in zebrafish. We also showed that miR-203 directly targets the Wnt signaling transcription factor Lef1 during this process. Repression of Lef1 by miR-203 blocks regeneration, whereas loss of miR-203 results in excess Lef1 levels and fin overgrowth. Expression of Lef1 from mRNAs lacking 3' UTR recognition elements can rescue the effects of excess miR-203, demonstrating that these effects are due to specific regulation of lef1 by miR-203. Our data support a model in which regulation of Lef1 protein levels by miR-203 is a key limiting step during regeneration.

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Year:  2008        PMID: 19015519      PMCID: PMC2587605          DOI: 10.1073/pnas.0803713105

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  42 in total

Review 1.  MicroRNA function in animal development.

Authors:  Erno Wienholds; Ronald H A Plasterk
Journal:  FEBS Lett       Date:  2005-08-10       Impact factor: 4.124

Review 2.  Gene regulation by microRNAs.

Authors:  Richard W Carthew
Journal:  Curr Opin Genet Dev       Date:  2006-02-28       Impact factor: 5.578

3.  Micro RNAs in animal development.

Authors:  Ronald H A Plasterk
Journal:  Cell       Date:  2006-03-10       Impact factor: 41.582

4.  The microRNA miR-181 targets the homeobox protein Hox-A11 during mammalian myoblast differentiation.

Authors:  Irina Naguibneva; Maya Ameyar-Zazoua; Anna Polesskaya; Slimane Ait-Si-Ali; Reguina Groisman; Mouloud Souidi; Sylvain Cuvellier; Annick Harel-Bellan
Journal:  Nat Cell Biol       Date:  2006-02-19       Impact factor: 28.824

5.  Widespread changes in protein synthesis induced by microRNAs.

Authors:  Matthias Selbach; Björn Schwanhäusser; Nadine Thierfelder; Zhuo Fang; Raya Khanin; Nikolaus Rajewsky
Journal:  Nature       Date:  2008-07-30       Impact factor: 49.962

6.  Heat-shock protein 60 is required for blastema formation and maintenance during regeneration.

Authors:  Shinji Makino; Geoffrey G Whitehead; Ching-Ling Lien; Soo Kim; Payal Jhawar; Akane Kono; Yasushi Kawata; Mark T Keating
Journal:  Proc Natl Acad Sci U S A       Date:  2005-10-04       Impact factor: 11.205

7.  Inhibition of zebrafish fin regeneration using in vivo electroporation of morpholinos against fgfr1 and msxb.

Authors:  Ryan Thummel; Shan Bai; Michael P Sarras; Peizhen Song; Jeffrey McDermott; Jeffrey Brewer; Martin Perry; Xiaoming Zhang; David R Hyde; Alan R Godwin
Journal:  Dev Dyn       Date:  2006-02       Impact factor: 3.780

8.  A genetic screen implicates miRNA-372 and miRNA-373 as oncogenes in testicular germ cell tumors.

Authors:  P Mathijs Voorhoeve; Carlos le Sage; Mariette Schrier; Ad J M Gillis; Hans Stoop; Remco Nagel; Ying-Poi Liu; Josyanne van Duijse; Jarno Drost; Alexander Griekspoor; Eitan Zlotorynski; Norikazu Yabuta; Gabriella De Vita; Hiroshi Nojima; Leendert H J Looijenga; Reuven Agami
Journal:  Cell       Date:  2006-03-24       Impact factor: 41.582

9.  The impact of microRNAs on protein output.

Authors:  Daehyun Baek; Judit Villén; Chanseok Shin; Fernando D Camargo; Steven P Gygi; David P Bartel
Journal:  Nature       Date:  2008-07-30       Impact factor: 49.962

10.  Transcriptional profiling of caudal fin regeneration in zebrafish.

Authors:  Michael Schebesta; Ching-Ling Lien; Felix B Engel; Mark T Keating
Journal:  ScientificWorldJournal       Date:  2006-06-02
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  51 in total

Review 1.  Small RNAs have a big impact on regeneration.

Authors:  Elizabeth J Thatcher; James G Patton
Journal:  RNA Biol       Date:  2010-05-14       Impact factor: 4.652

2.  p53 and microRNA-34 are suppressors of canonical Wnt signaling.

Authors:  Nam Hee Kim; Hyun Sil Kim; Nam-Gyun Kim; Inhan Lee; Hyung-Seok Choi; Xiao-Yan Li; Shi Eun Kang; So Young Cha; Joo Kyung Ryu; Jung Min Na; Changbum Park; Kunhong Kim; Sanghyuk Lee; Barry M Gumbiner; Jong In Yook; Stephen J Weiss
Journal:  Sci Signal       Date:  2011-11-01       Impact factor: 8.192

Review 3.  Wnt signaling and injury repair.

Authors:  Jemima L Whyte; Andrew A Smith; Jill A Helms
Journal:  Cold Spring Harb Perspect Biol       Date:  2012-08-01       Impact factor: 10.005

4.  MicroRNAs control hepatocyte proliferation during liver regeneration.

Authors:  Guisheng Song; Amar Deep Sharma; Garrett R Roll; Raymond Ng; Andrew Y Lee; Robert H Blelloch; Niels M Frandsen; Holger Willenbring
Journal:  Hepatology       Date:  2010-05       Impact factor: 17.425

5.  Heart of newt: a recipe for regeneration.

Authors:  Bhairab N Singh; Naoko Koyano-Nakagawa; John P Garry; Cyprian V Weaver
Journal:  J Cardiovasc Transl Res       Date:  2010-06-16       Impact factor: 4.132

6.  MicroRNA profiling of antler stem cells in potentiated and dormant states and their potential roles in antler regeneration.

Authors:  Hengxing Ba; Datao Wang; Chunyi Li
Journal:  Mol Genet Genomics       Date:  2016-01-06       Impact factor: 3.291

7.  Proteomic analysis of zebrafish caudal fin regeneration.

Authors:  Sandeep Saxena; Sachin K Singh; Mula G Meena Lakshmi; Vuppalapaty Meghah; Bhawna Bhatti; Cherukuvada V Brahmendra Swamy; Curam S Sundaram; Mohammed M Idris
Journal:  Mol Cell Proteomics       Date:  2012-01-25       Impact factor: 5.911

8.  miR-203 regulates progenitor cell proliferation during adult zebrafish retina regeneration.

Authors:  Kamya Rajaram; Rachel L Harding; David R Hyde; James G Patton
Journal:  Dev Biol       Date:  2014-05-20       Impact factor: 3.582

9.  Detection of 1α,25-dihydroxyvitamin D-regulated miRNAs in zebrafish by whole transcriptome sequencing.

Authors:  Theodore A Craig; Yuji Zhang; Andrew T Magis; Cory C Funk; Nathan D Price; Stephen C Ekker; Rajiv Kumar
Journal:  Zebrafish       Date:  2014-03-20       Impact factor: 1.985

Review 10.  MicroRNA-mediated control in the skin.

Authors:  R Yi; E Fuchs
Journal:  Cell Death Differ       Date:  2009-07-17       Impact factor: 15.828

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