Literature DB >> 19013466

Crystal structure and biochemical properties of a novel thermostable esterase containing an immunoglobulin-like domain.

Mark Levisson1, Lei Sun, Sjon Hendriks, Peter Swinkels, Twan Akveld, Jelle B Bultema, Arjan Barendregt, Robert H H van den Heuvel, Bauke W Dijkstra, John van der Oost, Servé W M Kengen.   

Abstract

Comparative analysis of the genome of the hyperthermophilic bacterium Thermotoga maritima revealed a hypothetical protein (EstA) with typical esterase features. The EstA protein was functionally produced in Escherichia coli and purified to homogeneity. It indeed displayed esterase activity with optima at or above 95 degrees C and at pH 8.5, with a preference for esters with short acyl chains (C2-C10). Its 2.6-A-resolution crystal structure revealed a classical alpha/beta hydrolase domain with a catalytic triad consisting of a serine, an aspartate, and a histidine. EstA is irreversibly inhibited by the organophosphate paraoxon. A 3.0-A-resolution structure confirmed that this inhibitor binds covalently to the catalytic serine residue of EstA. Remarkably, the structure also revealed the presence of an N-terminal immunoglobulin (Ig)-like domain, which is unprecedented among esterases. EstA forms a hexamer both in the crystal and in solution. Electron microscopy showed that the hexamer in solution is identical with the hexamer in the crystal, which is formed by two trimers, with the N-terminal domains facing each other. Mutational studies confirmed that residues Phe89, Phe112, Phe116, Phe246, and Trp377 affect enzyme activity. A truncated mutant of EstA, in which the Ig-like domain was removed, showed only 5% of wild-type activity, had lower thermostability, and failed to form hexamers. These data suggest that the Ig-like domain plays an important role in the enzyme multimerization and activity of EstA.

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Year:  2008        PMID: 19013466     DOI: 10.1016/j.jmb.2008.10.075

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  9 in total

1.  Screening and identification of a novel esterase EstPE from a metagenomic DNA library.

Authors:  So-Youn Park; Hyun-Jae Shin; Geun-Joong Kim
Journal:  J Microbiol       Date:  2011-03-03       Impact factor: 3.422

2.  Structural and biochemical characterization of a metagenome-derived esterase with a long N-terminal extension.

Authors:  Hiroyuki Okano; Xun Hong; Eiko Kanaya; Clement Angkawidjaja; Shigenori Kanaya
Journal:  Protein Sci       Date:  2014-12-05       Impact factor: 6.725

3.  Biochemical diversity of carboxyl esterases and lipases from Lake Arreo (Spain): a metagenomic approach.

Authors:  Mónica Martínez-Martínez; María Alcaide; Anatoli Tchigvintsev; Oleg Reva; Julio Polaina; Rafael Bargiela; María-Eugenia Guazzaroni; Alvaro Chicote; Albert Canet; Francisco Valero; Eugenio Rico Eguizabal; María del Carmen Guerrero; Alexander F Yakunin; Manuel Ferrer
Journal:  Appl Environ Microbiol       Date:  2013-03-29       Impact factor: 4.792

4.  Functional and structural characterization of a thermostable acetyl esterase from Thermotoga maritima.

Authors:  Mark Levisson; Gye Won Han; Marc C Deller; Qingping Xu; Peter Biely; Sjon Hendriks; Lynn F Ten Eyck; Claus Flensburg; Pietro Roversi; Mitchell D Miller; Daniel McMullan; Frank von Delft; Andreas Kreusch; Ashley M Deacon; John van der Oost; Scott A Lesley; Marc-André Elsliger; Servé W M Kengen; Ian A Wilson
Journal:  Proteins       Date:  2012-03-13

5.  Identification and Characterization of a New 7-Aminocephalosporanic Acid Deacetylase from Thermophilic Bacterium Alicyclobacillus tengchongensis.

Authors:  Jun-Mei Ding; Ting-Ting Yu; Nan-Yu Han; Jia-Lin Yu; Jun-Jun Li; Yun-Juan Yang; Xiang-Hua Tang; Bo Xu; Jun-Pei Zhou; Hong-Zhi Tang; Zun-Xi Huang
Journal:  J Bacteriol       Date:  2015-11-02       Impact factor: 3.490

6.  Structure of the starch-debranching enzyme barley limit dextrinase reveals homology of the N-terminal domain to CBM21.

Authors:  Marie Sofie Møller; Maher Abou Hachem; Birte Svensson; Anette Henriksen
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-08-29

7.  A novel cold-adapted and highly salt-tolerant esterase from Alkalibacterium sp. SL3 from the sediment of a soda lake.

Authors:  Guozeng Wang; Qiaohuang Wang; Xianju Lin; Tzi Bun Ng; Renxiang Yan; Juan Lin; Xiuyun Ye
Journal:  Sci Rep       Date:  2016-02-26       Impact factor: 4.379

8.  Identification and characterization of a novel alkalistable and salt-tolerant esterase from the deep-sea hydrothermal vent of the East Pacific Rise.

Authors:  Xinwei Yang; Lianzuan Wu; Ying Xu; Chongrong Ke; Fangfang Hu; Xiang Xiao; Jianzhong Huang
Journal:  Microbiologyopen       Date:  2018-03-05       Impact factor: 3.139

Review 9.  Carboxylic ester hydrolases from hyperthermophiles.

Authors:  Mark Levisson; John van der Oost; Servé W M Kengen
Journal:  Extremophiles       Date:  2009-06-21       Impact factor: 2.395

  9 in total

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