Literature DB >> 19011090

Structural basis of sequence-specific collagen recognition by SPARC.

Erhard Hohenester1, Takako Sasaki, Camilla Giudici, Richard W Farndale, Hans Peter Bächinger.   

Abstract

Protein interactions with the collagen triple helix play a critical role in collagen fibril formation, cell adhesion, and signaling. However, structural insight into sequence-specific collagen recognition is limited to an integrin-peptide complex. A GVMGFO motif in fibrillar collagens (O denotes 4-hydroxyproline) binds 3 unrelated proteins: von Willebrand factor (VWF), discoidin domain receptor 2 (DDR2), and the extracellular matrix protein SPARC/osteonectin/BM-40. We report the crystal structure at 3.2 A resolution of human SPARC bound to a triple-helical 33-residue peptide harboring the promiscuous GVMGFO motif. SPARC recognizes the GVMGFO motifs of the middle and trailing collagen chains, burying a total of 720 A(2) of solvent-accessible collagen surface. SPARC binding does not distort the canonical triple helix of the collagen peptide. In contrast, a critical loop in SPARC is substantially remodelled upon collagen binding, creating a deep pocket that accommodates the phenylalanine residue of the trailing collagen chain ("Phe pocket"). This highly restrictive specificity pocket is shared with the collagen-binding integrin I-domains but differs strikingly from the shallow collagen-binding grooves of the platelet receptor glycoprotein VI and microbial adhesins. We speculate that binding of the GVMGFO motif to VWF and DDR2 also results in structural changes and the formation of a Phe pocket.

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Year:  2008        PMID: 19011090      PMCID: PMC2587565          DOI: 10.1073/pnas.0808452105

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  41 in total

1.  Structural basis of collagen recognition by integrin alpha2beta1.

Authors:  J Emsley; C G Knight; R W Farndale; M J Barnes; R C Liddington
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2.  C-H...pi-interactions in proteins.

Authors:  M Brandl; M S Weiss; A Jabs; J Sühnel; R Hilgenfeld
Journal:  J Mol Biol       Date:  2001-03-16       Impact factor: 5.469

Review 3.  The collagen family members as cell adhesion proteins.

Authors:  Jyrki Heino
Journal:  Bioessays       Date:  2007-10       Impact factor: 4.345

4.  Structural basis of the collagen-binding mode of discoidin domain receptor 2.

Authors:  Osamu Ichikawa; Masanori Osawa; Noritaka Nishida; Naoki Goshima; Nobuo Nomura; Ichio Shimada
Journal:  EMBO J       Date:  2007-08-16       Impact factor: 11.598

5.  Structural basis for platelet collagen responses by the immune-type receptor glycoprotein VI.

Authors:  Katsunori Horii; Mark L Kahn; Andrew B Herr
Journal:  Blood       Date:  2006-08-01       Impact factor: 22.113

6.  Experimental indication for the existence of multiple Trp rotamers in von Willebrand Factor A3 domain.

Authors:  Mario Hellings; Yves Engelborghs; Hans Deckmyn; Karen Vanhoorelbeke; Marion E Schiphorst; Jan Willem N Akkerman; Marc De Maeyer
Journal:  Proteins       Date:  2004-11-15

7.  Importance of the basement membrane protein SPARC for viability and fertility in Caenorhabditis elegans.

Authors:  M C Fitzgerald; J E Schwarzbauer
Journal:  Curr Biol       Date:  1998-11-19       Impact factor: 10.834

Review 8.  Mammalian collagen IV.

Authors:  Jamshid Khoshnoodi; Vadim Pedchenko; Billy G Hudson
Journal:  Microsc Res Tech       Date:  2008-05       Impact factor: 2.769

Review 9.  Cell-collagen interactions: the use of peptide Toolkits to investigate collagen-receptor interactions.

Authors:  Richard W Farndale; Ton Lisman; Dominique Bihan; Samir Hamaia; Christiane S Smerling; Nicholas Pugh; Antonios Konitsiotis; Birgit Leitinger; Philip G de Groot; Gavin E Jarvis; Nicolas Raynal
Journal:  Biochem Soc Trans       Date:  2008-04       Impact factor: 5.407

10.  Characterization of high affinity binding motifs for the discoidin domain receptor DDR2 in collagen.

Authors:  Antonios D Konitsiotis; Nicolas Raynal; Dominique Bihan; Erhard Hohenester; Richard W Farndale; Birgit Leitinger
Journal:  J Biol Chem       Date:  2008-01-16       Impact factor: 5.157

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  58 in total

1.  Implications for collagen I chain registry from the structure of the collagen von Willebrand factor A3 domain complex.

Authors:  T Harma C Brondijk; Dominique Bihan; Richard W Farndale; Eric G Huizinga
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-21       Impact factor: 11.205

Review 2.  Mapping structural landmarks, ligand binding sites, and missense mutations to the collagen IV heterotrimers predicts major functional domains, novel interactions, and variation in phenotypes in inherited diseases affecting basement membranes.

Authors:  J Des Parkin; James D San Antonio; Vadim Pedchenko; Billy Hudson; Shane T Jensen; Judy Savige
Journal:  Hum Mutat       Date:  2011-02       Impact factor: 4.878

Review 3.  Structural insights into the interactions between platelet receptors and fibrillar collagen.

Authors:  Andrew B Herr; Richard W Farndale
Journal:  J Biol Chem       Date:  2009-04-28       Impact factor: 5.157

4.  Computational design of self-assembling register-specific collagen heterotrimers.

Authors:  Jorge A Fallas; Jeffrey D Hartgerink
Journal:  Nat Commun       Date:  2012       Impact factor: 14.919

5.  Role of hydration in collagen recognition by bacterial adhesins.

Authors:  Luigi Vitagliano; Rita Berisio; Alfonso De Simone
Journal:  Biophys J       Date:  2011-05-04       Impact factor: 4.033

6.  Molecular basis for the action of the collagen-specific chaperone Hsp47/SERPINH1 and its structure-specific client recognition.

Authors:  Christine Widmer; Jan M Gebauer; Elena Brunstein; Sabrina Rosenbaum; Frank Zaucke; Cord Drögemüller; Tosso Leeb; Ulrich Baumann
Journal:  Proc Natl Acad Sci U S A       Date:  2012-07-30       Impact factor: 11.205

7.  Engineering novel complement activity into a pulmonary surfactant protein.

Authors:  Umakhanth Venkatraman Girija; Christopher Furze; Julia Toth; Wilhelm J Schwaeble; Daniel A Mitchell; Anthony H Keeble; Russell Wallis
Journal:  J Biol Chem       Date:  2010-01-29       Impact factor: 5.157

8.  SPARC functions as an inhibitor of adipogenesis.

Authors:  Jing Nie; E Helene Sage
Journal:  J Cell Commun Signal       Date:  2009-10-02       Impact factor: 5.782

9.  The role of SPARC in extracellular matrix assembly.

Authors:  Amy D Bradshaw
Journal:  J Cell Commun Signal       Date:  2009-10-02       Impact factor: 5.782

10.  Crystallographic insight into collagen recognition by discoidin domain receptor 2.

Authors:  Federico Carafoli; Dominique Bihan; Stavros Stathopoulos; Antonios D Konitsiotis; Marc Kvansakul; Richard W Farndale; Birgit Leitinger; Erhard Hohenester
Journal:  Structure       Date:  2009-12-09       Impact factor: 5.006

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