Literature DB >> 19009049

Novel strategies for the site-specific covalent labelling of nucleic acids.

Samuel H Weisbrod1, Andreas Marx.   

Abstract

To broaden the scope of applications in DNA nano- and biotechnology, material science, diagnostics and molecular recognition the functionalization of DNA is of utmost importance. In the last decade many new methods have been developed to achieve this goal. Apart from the direct chemical synthesis of modified DNA by automated phosphoramidite chemistry incorporation of labelled triphosphates and the post-synthetic labelling approach evolved as valuable methods. New bioorthogonal reactions as Diels-Alder, click and Staudinger ligations pushed forward the post-synthetic approach as new insights into DNA polymerase substrate specificity allowed generation and amplification of labelled DNA strands. These novel developments are summarized herein.

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Year:  2008        PMID: 19009049     DOI: 10.1039/b809528k

Source DB:  PubMed          Journal:  Chem Commun (Camb)        ISSN: 1359-7345            Impact factor:   6.222


  33 in total

1.  Immuno-hybridization chain reaction for enhancing detection of individual cytokine-secreting human peripheral mononuclear cells.

Authors:  Jonghoon Choi; Kerry Routenberg Love; Yuan Gong; Todd M Gierahn; J Christopher Love
Journal:  Anal Chem       Date:  2011-08-15       Impact factor: 6.986

Review 2.  Carbon Substrates: A Stable Foundation for Biomolecular Arrays.

Authors:  Matthew R Lockett; Lloyd M Smith
Journal:  Annu Rev Anal Chem (Palo Alto Calif)       Date:  2015-06-03       Impact factor: 10.745

Review 3.  DNA-multichromophore systems.

Authors:  Yin Nah Teo; Eric T Kool
Journal:  Chem Rev       Date:  2012-03-16       Impact factor: 60.622

4.  Directed evolution of DNA polymerases for next-generation sequencing.

Authors:  Aaron M Leconte; Maha P Patel; Lauryn E Sass; Peter McInerney; Mirna Jarosz; Li Kung; Jayson L Bowers; Philip R Buzby; J William Efcavitch; Floyd E Romesberg
Journal:  Angew Chem Int Ed Engl       Date:  2010-08-09       Impact factor: 15.336

Review 5.  Labeling DNA for single-molecule experiments: methods of labeling internal specific sequences on double-stranded DNA.

Authors:  Hagar Zohar; Susan J Muller
Journal:  Nanoscale       Date:  2011-07-06       Impact factor: 7.790

6.  Expanding the scope of replicable unnatural DNA: stepwise optimization of a predominantly hydrophobic base pair.

Authors:  Thomas Lavergne; Mélissa Degardin; Denis A Malyshev; Henry T Quach; Kirandeep Dhami; Phillip Ordoukhanian; Floyd E Romesberg
Journal:  J Am Chem Soc       Date:  2013-04-02       Impact factor: 15.419

7.  Comparative Study of Novel Fluorescent Cyanine Nucleotides: Hybridization Analysis of Labeled PCR Products Using a Biochip.

Authors:  V E Shershov; S A Lapa; V E Kuznetsova; M A Spitsyn; T O Guseinov; S A Polyakov; A A Stomahin; A S Zasedatelev; A V Chudinov
Journal:  J Fluoresc       Date:  2017-07-28       Impact factor: 2.217

8.  Synthetic incorporation of Nile Blue into DNA using 2'-deoxyriboside substitutes: Representative comparison of (R)- and (S)-aminopropanediol as an acyclic linker.

Authors:  Daniel Lachmann; Sina Berndl; Otto S Wolfbeis; Hans-Achim Wagenknecht
Journal:  Beilstein J Org Chem       Date:  2010-02-09       Impact factor: 2.883

9.  CyDNA: synthesis and replication of highly Cy-dye substituted DNA by an evolved polymerase.

Authors:  Nicola Ramsay; Ann-Sofie Jemth; Anthony Brown; Neal Crampton; Paul Dear; Philipp Holliger
Journal:  J Am Chem Soc       Date:  2010-04-14       Impact factor: 15.419

10.  Cleavage of adenine-modified functionalized DNA by type II restriction endonucleases.

Authors:  Hana Macícková-Cahová; Michal Hocek
Journal:  Nucleic Acids Res       Date:  2009-12       Impact factor: 16.971

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