Literature DB >> 19004762

Real-time luminescence monitoring of cell-cycle and respiratory oscillations in yeast.

J Brian Robertson1, Chris C Stowers, Erik Boczko, Carl Hirschie Johnson.   

Abstract

The use of luciferase reporters has become a precise, noninvasive, high-throughput method for real-time monitoring of promoter activity in living cells, especially for rhythmic biological processes such as circadian rhythms. We developed a destabilized firefly luciferase as a reporter for rhythmic promoter activity in both the cell division and respiratory cycles of the budding yeast Saccharomyces cerevisiae in which real-time luminescence reporters have not been previously applied. The continuous output of light from luciferase reporters allowed us to explore the relationship between the cell division cycle and the yeast respiratory oscillation, including the observation of responses to chemicals that cause phase shifting of the respiratory oscillations. Destabilized firefly luciferase is a good reporter of cell cycle position in synchronized or partially synchronized yeast cultures, in both batch and continuous cultures. In addition, the oxygen dependence of luciferase can be used under certain conditions as a genetically encodable oxygen monitor. Finally, we use this reporter to show that there is a direct correlation between premature induction of cell division and phase resetting of the respiratory oscillation under the continuous culture conditions tested.

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Year:  2008        PMID: 19004762      PMCID: PMC2584751          DOI: 10.1073/pnas.0809482105

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  31 in total

1.  Visualization of mPer1 transcription in vitro: NMDA induces a rapid phase shift of mPer1 gene in cultured SCN.

Authors:  M Asai; S Yamaguchi; H Isejima; M Jonouchi; T Moriya; S Shibata; M Kobayashi; H Okamura
Journal:  Curr Biol       Date:  2001-10-02       Impact factor: 10.834

2.  Global analysis of protein localization in budding yeast.

Authors:  Won-Ki Huh; James V Falvo; Luke C Gerke; Adam S Carroll; Russell W Howson; Jonathan S Weissman; Erin K O'Shea
Journal:  Nature       Date:  2003-10-16       Impact factor: 49.962

3.  The effect of oxygen upon the immobilization reaction in firefly luminescence.

Authors:  J W HASTINGS; W D McELROY; J COULOMBRE
Journal:  J Cell Comp Physiol       Date:  1953-08

4.  Logic of the yeast metabolic cycle: temporal compartmentalization of cellular processes.

Authors:  Benjamin P Tu; Andrzej Kudlicki; Maga Rowicka; Steven L McKnight
Journal:  Science       Date:  2005-10-27       Impact factor: 47.728

5.  Circadian clock mutants in Arabidopsis identified by luciferase imaging.

Authors:  A J Millar; I A Carré; C A Strayer; N H Chua; S A Kay
Journal:  Science       Date:  1995-02-24       Impact factor: 47.728

6.  G1-specific cyclins of S. cerevisiae: cell cycle periodicity, regulation by mating pheromone, and association with the p34CDC28 protein kinase.

Authors:  C Wittenberg; K Sugimoto; S I Reed
Journal:  Cell       Date:  1990-07-27       Impact factor: 41.582

7.  Fully codon-optimized luciferase uncovers novel temperature characteristics of the Neurospora clock.

Authors:  Van D Gooch; Arun Mehra; Luis F Larrondo; Julie Fox; Melissa Touroutoutoudis; Jennifer J Loros; Jay C Dunlap
Journal:  Eukaryot Cell       Date:  2007-08-31

8.  Oscillations in continuous cultures of budding yeast: a segregated parameter analysis.

Authors:  D Porro; E Martegani; B M Ranzi; L Alberghina
Journal:  Biotechnol Bioeng       Date:  1988-08-05       Impact factor: 4.530

9.  Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization.

Authors:  P T Spellman; G Sherlock; M Q Zhang; V R Iyer; K Anders; M B Eisen; P O Brown; D Botstein; B Futcher
Journal:  Mol Biol Cell       Date:  1998-12       Impact factor: 4.138

10.  Novel features of drosophila period Transcription revealed by real-time luciferase reporting.

Authors:  C Brandes; J D Plautz; R Stanewsky; C F Jamison; M Straume; K V Wood; S A Kay; J C Hall
Journal:  Neuron       Date:  1996-04       Impact factor: 17.173

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  30 in total

1.  Metabolic cycling without cell division cycling in respiring yeast.

Authors:  Nikolai Slavov; Joanna Macinskas; Amy Caudy; David Botstein
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-07       Impact factor: 11.205

2.  Clustering in cell cycle dynamics with general response/signaling feedback.

Authors:  Todd R Young; Bastien Fernandez; Richard Buckalew; Gregory Moses; Erik M Boczko
Journal:  J Theor Biol       Date:  2011-10-08       Impact factor: 2.691

3.  Visible light alters yeast metabolic rhythms by inhibiting respiration.

Authors:  James Brian Robertson; Chris R Davis; Carl Hirschie Johnson
Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-02       Impact factor: 11.205

4.  Instability of the steady state solution in cell cycle population structure models with feedback.

Authors:  Balázs Bárány; Gregory Moses; Todd Young
Journal:  J Math Biol       Date:  2018-12-06       Impact factor: 2.259

5.  Cell cycle dynamics: clustering is universal in negative feedback systems.

Authors:  Nathan Breitsch; Gregory Moses; Erik Boczko; Todd Young
Journal:  J Math Biol       Date:  2014-05-10       Impact factor: 2.259

Review 6.  Systems approaches for the study of metabolic cycles in yeast.

Authors:  Sunil Laxman; Benjamin P Tu
Journal:  Curr Opin Genet Dev       Date:  2010-11-02       Impact factor: 5.578

7.  ODE, RDE and SDE models of cell cycle dynamics and clustering in yeast.

Authors:  Erik M Boczko; Tomas Gedeon; Chris C Stowers; Todd R Young
Journal:  J Biol Dyn       Date:  2010-07       Impact factor: 2.179

8.  Luminescence as a continuous real-time reporter of promoter activity in yeast undergoing respiratory oscillations or cell division rhythms.

Authors:  J Brian Robertson; Carl Hirschie Johnson
Journal:  Methods Mol Biol       Date:  2011

9.  In vivo bioluminescence imaging and histopathopathologic analysis reveal distinct roles for resident and recruited immune effector cells in defense against invasive aspergillosis.

Authors:  Oumaïma Ibrahim-Granet; Grégory Jouvion; Tobias M Hohl; Sabrina Droin-Bergère; François Philippart; Oh Yoen Kim; Minou Adib-Conquy; Reto Schwendener; Jean-Marc Cavaillon; Matthias Brock
Journal:  BMC Microbiol       Date:  2010-04-08       Impact factor: 3.605

10.  A switchable light-input, light-output system modelled and constructed in yeast.

Authors:  Oxana Sorokina; Anita Kapus; Kata Terecskei; Laura E Dixon; Laszlo Kozma-Bognar; Ferenc Nagy; Andrew J Millar
Journal:  J Biol Eng       Date:  2009-09-17       Impact factor: 4.355

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