Literature DB >> 19001166

Role of the tau gene region chromosome inversion in progressive supranuclear palsy, corticobasal degeneration, and related disorders.

Amy Webb1, Bruce Miller, Stephen Bonasera, Adam Boxer, Anna Karydas, Kirk C Wilhelmsen.   

Abstract

BACKGROUND: An inverted region on chromosome 17 has been previously linked to many Pick complex diseases. Due to the inversion, an exact causal locus has been difficult to identify, but the microtubule-associated protein tau gene is a likely candidate gene for its involvement in these diseases with tau inclusion.
OBJECTIVE: To search for variants that confer susceptibility to 4 tauopathies and clinically related disorders.
DESIGN: Genomewide association study.
SETTING: University research laboratory. PARTICIPANTS: A total of 231 samples were genotyped from an unrelated white population of patients with progressive supranuclear palsy (PSP), corticobasal degeneration (CBD), frontotemporal dementia, and frontotemporal dementia with amyotrophy. Unaffected individuals from the same population were used as controls. MAIN OUTCOME MEASURES: The results from an inverted region of chromosome 17 that contains the MAPT gene. Genotypes of cases and controls were compared using a Fisher exact test on a marker-by-marker basis. Haplotypes were determined by visually inspecting genotypes.
RESULTS: Comparing any particular disease and controls, the association was constant across the inverted chromosome segment. Significant associations were seen for PSP and PSP combined with CBD. Of the 2 haplotypes seen in the region, H1 was overrepresented in PSP and CBD cases compared with controls.
CONCLUSIONS: As expected, the markers are highly correlated and the association is seen across the entire region, which makes it difficult to narrow down a disease-causing variant or even a possible candidate gene. However, considering the pathologic abnormalities of these diseases and the involvement of tau mutations seen in familial forms, the MAPT gene represents the most likely cause driving the association.

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Year:  2008        PMID: 19001166      PMCID: PMC2680206          DOI: 10.1001/archneur.65.11.1473

Source DB:  PubMed          Journal:  Arch Neurol        ISSN: 0003-9942


  12 in total

1.  A common inversion under selection in Europeans.

Authors:  Hreinn Stefansson; Agnar Helgason; Gudmar Thorleifsson; Valgerdur Steinthorsdottir; Gisli Masson; John Barnard; Adam Baker; Aslaug Jonasdottir; Andres Ingason; Vala G Gudnadottir; Natasa Desnica; Andrew Hicks; Arnaldur Gylfason; Daniel F Gudbjartsson; Gudrun M Jonsdottir; Jesus Sainz; Kari Agnarsson; Birgitta Birgisdottir; Shyamali Ghosh; Adalheidur Olafsdottir; Jean-Baptiste Cazier; Kristleifur Kristjansson; Michael L Frigge; Thorgeir E Thorgeirsson; Jeffrey R Gulcher; Augustine Kong; Kari Stefansson
Journal:  Nat Genet       Date:  2005-01-16       Impact factor: 38.330

Review 2.  Frontotemporal dementia.

Authors:  David Neary; Julie Snowden; David Mann
Journal:  Lancet Neurol       Date:  2005-11       Impact factor: 44.182

3.  Genomic architecture of human 17q21 linked to frontotemporal dementia uncovers a highly homologous family of low-copy repeats in the tau region.

Authors:  Marc Cruts; Rosa Rademakers; Ilse Gijselinck; Julie van der Zee; Bart Dermaut; Tim de Pooter; Peter de Rijk; Jurgen Del-Favero; Christine van Broeckhoven
Journal:  Hum Mol Genet       Date:  2005-05-11       Impact factor: 6.150

Review 4.  Tauopathies: classification and clinical update on neurodegenerative diseases associated with microtubule-associated protein tau.

Authors:  D R Williams
Journal:  Intern Med J       Date:  2006-10       Impact factor: 2.048

5.  Association of an extended haplotype in the tau gene with progressive supranuclear palsy.

Authors:  M Baker; I Litvan; H Houlden; J Adamson; D Dickson; J Perez-Tur; J Hardy; T Lynch; E Bigio; M Hutton
Journal:  Hum Mol Genet       Date:  1999-04       Impact factor: 6.150

6.  Clinicopathologic analysis of frontotemporal and corticobasal degenerations and PSP.

Authors:  K A Josephs; R C Petersen; D S Knopman; B F Boeve; J L Whitwell; J R Duffy; J E Parisi; D W Dickson
Journal:  Neurology       Date:  2006-01-10       Impact factor: 9.910

7.  Genetic evidence for the involvement of tau in progressive supranuclear palsy.

Authors:  C Conrad; A Andreadis; J Q Trojanowski; D W Dickson; D Kang; X Chen; W Wiederholt; L Hansen; E Masliah; L J Thal; R Katzman; Y Xia; T Saitoh
Journal:  Ann Neurol       Date:  1997-02       Impact factor: 10.422

Review 8.  The role of tau (MAPT) in frontotemporal dementia and related tauopathies.

Authors:  R Rademakers; M Cruts; C van Broeckhoven
Journal:  Hum Mutat       Date:  2004-10       Impact factor: 4.878

Review 9.  Pick Complex: an integrative approach to frontotemporal dementia: primary progressive aphasia, corticobasal degeneration, and progressive supranuclear palsy.

Authors:  Andrew Kertesz
Journal:  Neurologist       Date:  2003-11       Impact factor: 1.398

Review 10.  Untangling the tau gene association with neurodegenerative disorders.

Authors:  Alan M Pittman; Hon-Chung Fung; Rohan de Silva
Journal:  Hum Mol Genet       Date:  2006-10-15       Impact factor: 6.150

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  17 in total

Review 1.  Genomic architecture and functional effects of potential human inversion supergenes.

Authors:  Elena Campoy; Marta Puig; Illya Yakymenko; Jon Lerga-Jaso; Mario Cáceres
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2022-06-13       Impact factor: 6.671

2.  H2 haplotype at chromosome 17q21.31 protects against childhood sexual abuse-associated risk for alcohol consumption and dependence.

Authors:  Elliot C Nelson; Arpana Agrawal; Michele L Pergadia; Jen C Wang; John B Whitfield; F Scott Saccone; Jason Kern; Julia D Grant; Andrew J Schrage; John P Rice; Grant W Montgomery; Andrew C Heath; Alison M Goate; Nicholas G Martin; Pamela A F Madden
Journal:  Addict Biol       Date:  2010-01       Impact factor: 4.280

3.  Genome-wide association study identifies common variants at four loci as genetic risk factors for Parkinson's disease.

Authors:  Wataru Satake; Yuko Nakabayashi; Ikuko Mizuta; Yushi Hirota; Chiyomi Ito; Michiaki Kubo; Takahisa Kawaguchi; Tatsuhiko Tsunoda; Masahiko Watanabe; Atsushi Takeda; Hiroyuki Tomiyama; Kenji Nakashima; Kazuko Hasegawa; Fumiya Obata; Takeo Yoshikawa; Hideshi Kawakami; Saburo Sakoda; Mitsutoshi Yamamoto; Nobutaka Hattori; Miho Murata; Yusuke Nakamura; Tatsushi Toda
Journal:  Nat Genet       Date:  2009-11-15       Impact factor: 38.330

4.  Developmental origins of genotype-phenotype correlations in chronic diseases of old age.

Authors:  Shana McCormack; Qianghua Xia; Struan F A Grant
Journal:  Aging Dis       Date:  2012-09-10       Impact factor: 6.745

5.  Common variants at 12q15 and 12q24 are associated with infant head circumference.

Authors:  H Rob Taal; Beate St Pourcain; Elisabeth Thiering; Shikta Das; Dennis O Mook-Kanamori; Nicole M Warrington; Marika Kaakinen; Eskil Kreiner-Møller; Jonathan P Bradfield; Rachel M Freathy; Frank Geller; Mònica Guxens; Diana L Cousminer; Marjan Kerkhof; Nicholas J Timpson; M Arfan Ikram; Lawrence J Beilin; Klaus Bønnelykke; Jessica L Buxton; Pimphen Charoen; Bo Lund Krogsgaard Chawes; Johan Eriksson; David M Evans; Albert Hofman; John P Kemp; Cecilia E Kim; Norman Klopp; Jari Lahti; Stephen J Lye; George McMahon; Frank D Mentch; Martina Müller; Paul F O'Reilly; Inga Prokopenko; Fernando Rivadeneira; Eric A P Steegers; Jordi Sunyer; Carla Tiesler; Hanieh Yaghootkar; Monique M B Breteler; Stephanie Debette; Myriam Fornage; Vilmundur Gudnason; Lenore J Launer; Aad van der Lugt; Thomas H Mosley; Sudha Seshadri; Albert V Smith; Meike W Vernooij; Alexandra If Blakemore; Rosetta M Chiavacci; Bjarke Feenstra; Julio Fernandez-Benet; Struan F A Grant; Anna-Liisa Hartikainen; Albert J van der Heijden; Carmen Iñiguez; Mark Lathrop; Wendy L McArdle; Anne Mølgaard; John P Newnham; Lyle J Palmer; Aarno Palotie; Annneli Pouta; Susan M Ring; Ulla Sovio; Marie Standl; Andre G Uitterlinden; H-Erich Wichmann; Nadja Hawwa Vissing; Charles DeCarli; Cornelia M van Duijn; Mark I McCarthy; Gerard H Koppelman; Xavier Estivill; Andrew T Hattersley; Mads Melbye; Hans Bisgaard; Craig E Pennell; Elisabeth Widen; Hakon Hakonarson; George Davey Smith; Joachim Heinrich; Marjo-Riitta Jarvelin; Vincent W V Jaddoe
Journal:  Nat Genet       Date:  2012-04-15       Impact factor: 38.330

6.  Gene Expression Imputation Across Multiple Tissue Types Provides Insight Into the Genetic Architecture of Frontotemporal Dementia and Its Clinical Subtypes.

Authors:  Lianne M Reus; Bogdan Pasaniuc; Danielle Posthuma; Toni Boltz; Yolande A L Pijnenburg; Roel A Ophoff
Journal:  Biol Psychiatry       Date:  2021-01-09       Impact factor: 12.810

7.  Functional Impact and Evolution of a Novel Human Polymorphic Inversion That Disrupts a Gene and Creates a Fusion Transcript.

Authors:  Marta Puig; David Castellano; Lorena Pantano; Carla Giner-Delgado; David Izquierdo; Magdalena Gayà-Vidal; José Ignacio Lucas-Lledó; Tõnu Esko; Chikashi Terao; Fumihiko Matsuda; Mario Cáceres
Journal:  PLoS Genet       Date:  2015-10-01       Impact factor: 5.917

Review 8.  Human inversions and their functional consequences.

Authors:  Marta Puig; Sònia Casillas; Sergi Villatoro; Mario Cáceres
Journal:  Brief Funct Genomics       Date:  2015-05-20       Impact factor: 4.241

Review 9.  Meta-analysis of the association between variants in MAPT and neurodegenerative diseases.

Authors:  Cheng-Cheng Zhang; Jun-Xia Zhu; Yu Wan; Lin Tan; Hui-Fu Wang; Jin-Tai Yu; Lan Tan
Journal:  Oncotarget       Date:  2017-07-04

10.  Common inversion polymorphism at 17q21.31 affects expression of multiple genes in tissue-specific manner.

Authors:  Simone de Jong; Iouri Chepelev; Esther Janson; Eric Strengman; Leonard H van den Berg; Jan H Veldink; Roel A Ophoff
Journal:  BMC Genomics       Date:  2012-09-06       Impact factor: 3.969

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