Literature DB >> 18997341

Purification, crystallization and preliminary X-ray diffraction analysis of the Whirly domain of StWhy2 in complex with single-stranded DNA.

Laurent Cappadocia1, Jurgen Sygusch, Normand Brisson.   

Abstract

StWhy1 and StWhy2 are members of the Whirly family of single-stranded DNA (ssDNA) binding proteins. To understand the mode of binding of the Whirly proteins to single-stranded DNA, crystals of the Whirly domains of both StWhy1 and StWhy2 in complex with single-stranded DNA were obtained by the hanging-drop vapour-diffusion method. The diffraction patterns of the StWhy1-ssDNA complex crystals displayed severe anisotropy and were of low resolution, making them unsuitable for structure determination. In contrast, the crystals of the StWhy2-ssDNA complex diffracted isotropically to 2.20 A resolution. The crystallization and data collection to 2.20 A resolution of StWhy2 in the free form are also reported.

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Year:  2008        PMID: 18997341      PMCID: PMC2581700          DOI: 10.1107/S1744309108032399

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  9 in total

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Authors:  Matthieu Vermel; Benoit Guermann; Ludovic Delage; Jean-Michel Grienenberger; Laurence Maréchal-Drouard; José M Gualberto
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-23       Impact factor: 11.205

Review 2.  A deliberate approach to screening for initial crystallization conditions of biological macromolecules.

Authors:  Joseph R Luft; Robert J Collins; Nancy A Fehrman; Angela M Lauricella; Christina K Veatch; George T DeTitta
Journal:  J Struct Biol       Date:  2003-04       Impact factor: 2.867

3.  A new family of plant transcription factors displays a novel ssDNA-binding surface.

Authors:  Darrell Desveaux; Julie Allard; Normand Brisson; Jurgen Sygusch
Journal:  Nat Struct Biol       Date:  2002-07

Review 4.  Whirly transcription factors: defense gene regulation and beyond.

Authors:  Darrell Desveaux; Alexandre Maréchal; Normand Brisson
Journal:  Trends Plant Sci       Date:  2005-02       Impact factor: 18.313

5.  Crystallization and preliminary X-ray crystallographic analysis of p24, a component of the potato nuclear factor PBF-2.

Authors:  Darrell Desveaux; Julie Allard; Normand Brisson; Jurgen Sygusch
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-01-24

6.  Single-stranded DNA binding factor AtWHY1 modulates telomere length homeostasis in Arabidopsis.

Authors:  Hyun Hee Yoo; Chian Kwon; Myeong Min Lee; In Kwon Chung
Journal:  Plant J       Date:  2007-01-01       Impact factor: 6.417

7.  PBF-2 is a novel single-stranded DNA binding factor implicated in PR-10a gene activation in potato.

Authors:  D Desveaux; C Després; A Joyeux; R Subramaniam; N Brisson
Journal:  Plant Cell       Date:  2000-08       Impact factor: 11.277

8.  A "Whirly" transcription factor is required for salicylic acid-dependent disease resistance in Arabidopsis.

Authors:  Darrell Desveaux; Rajagopal Subramaniam; Charles Després; Jean-Nicholas Mess; Caroline Lévesque; Pierre R Fobert; Jeffery L Dangl; Normand Brisson
Journal:  Dev Cell       Date:  2004-02       Impact factor: 12.270

9.  Overexpression of mtDNA-associated AtWhy2 compromises mitochondrial function.

Authors:  Alexandre Maréchal; Jean-Sébastien Parent; Mohammed Sabar; Félix Véronneau-Lafortune; Charbel Abou-Rached; Normand Brisson
Journal:  BMC Plant Biol       Date:  2008-04-18       Impact factor: 4.215

  9 in total
  3 in total

1.  Crystal structures of DNA-Whirly complexes and their role in Arabidopsis organelle genome repair.

Authors:  Laurent Cappadocia; Alexandre Maréchal; Jean-Sébastien Parent; Etienne Lepage; Jurgen Sygusch; Normand Brisson
Journal:  Plant Cell       Date:  2010-06-15       Impact factor: 11.277

2.  A family portrait: structural comparison of the Whirly proteins from Arabidopsis thaliana and Solanum tuberosum.

Authors:  Laurent Cappadocia; Jean-Sébastien Parent; Jurgen Sygusch; Normand Brisson
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-10-26

3.  A conserved lysine residue of plant Whirly proteins is necessary for higher order protein assembly and protection against DNA damage.

Authors:  Laurent Cappadocia; Jean-Sébastien Parent; Eric Zampini; Etienne Lepage; Jurgen Sygusch; Normand Brisson
Journal:  Nucleic Acids Res       Date:  2011-09-12       Impact factor: 16.971

  3 in total

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