Literature DB >> 18992956

Co-evolution of the branch site and SR proteins in eukaryotes.

Mireya Plass1, Eneritz Agirre, Diana Reyes, Francisco Camara, Eduardo Eyras.   

Abstract

Serine-arginine-rich (SR) proteins are essential for splicing in metazoans but are absent in yeast. By contrast, many fungi have SR protein homologs with variable arginine-rich regions analogous to the arginine-serine-rich (RS) domain in metazoans. The density of RS repeats in these regions correlates with the conservation of the branch site signal, providing evidence for an ancestral origin of SR proteins and indicating that the SR proteins and the branch site co-evolved.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 18992956     DOI: 10.1016/j.tig.2008.10.004

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  24 in total

1.  A single ancient origin for prototypical serine/arginine-rich splicing factors.

Authors:  Sophie Califice; Denis Baurain; Marc Hanikenne; Patrick Motte
Journal:  Plant Physiol       Date:  2011-12-12       Impact factor: 8.340

Review 2.  Alternative splicing and evolution: diversification, exon definition and function.

Authors:  Hadas Keren; Galit Lev-Maor; Gil Ast
Journal:  Nat Rev Genet       Date:  2010-04-08       Impact factor: 53.242

3.  RNA secondary structure mediates alternative 3'ss selection in Saccharomyces cerevisiae.

Authors:  Mireya Plass; Carles Codony-Servat; Pedro Gabriel Ferreira; Josep Vilardell; Eduardo Eyras
Journal:  RNA       Date:  2012-04-26       Impact factor: 4.942

4.  Complex selection on 5' splice sites in intron-rich organisms.

Authors:  Manuel Irimia; Scott William Roy; Daniel E Neafsey; Josep F Abril; Jordi Garcia-Fernandez; Eugene V Koonin
Journal:  Genome Res       Date:  2009-09-10       Impact factor: 9.043

5.  Origin of spliceosomal introns and alternative splicing.

Authors:  Manuel Irimia; Scott William Roy
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-06-02       Impact factor: 10.005

6.  SR protein kinases promote splicing of nonconsensus introns.

Authors:  Jesse J Lipp; Michael C Marvin; Kevan M Shokat; Christine Guthrie
Journal:  Nat Struct Mol Biol       Date:  2015-07-13       Impact factor: 15.369

7.  Why eukaryotic cells use introns to enhance gene expression: splicing reduces transcription-associated mutagenesis by inhibiting topoisomerase I cutting activity.

Authors:  Deng-Ke Niu; Yu-Fei Yang
Journal:  Biol Direct       Date:  2011-05-18       Impact factor: 4.540

Review 8.  Evolution of SR protein and hnRNP splicing regulatory factors.

Authors:  Anke Busch; Klemens J Hertel
Journal:  Wiley Interdiscip Rev RNA       Date:  2011-09-02       Impact factor: 9.957

9.  SR-like RNA-binding protein Slr1 affects Candida albicans filamentation and virulence.

Authors:  Chaiyaboot Ariyachet; Norma V Solis; Yaoping Liu; Nemani V Prasadarao; Scott G Filler; Anne E McBride
Journal:  Infect Immun       Date:  2013-02-04       Impact factor: 3.441

Review 10.  The SR protein family.

Authors:  Peter J Shepard; Klemens J Hertel
Journal:  Genome Biol       Date:  2009-10-27       Impact factor: 13.583

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.