Literature DB >> 18989795

Diagnosis of colon cancer by attenuated total reflectance-Fourier transform infrared microspectroscopy and soft independent modeling of class analogy.

Mohammadreza Khanmohammadi1, Amir Bagheri Garmarudi, Keyvan Ghasemi, Hadigheh Kazemi Jaliseh, Ahmad Kaviani.   

Abstract

This study tries to demonstrate that attenuated total reflectance-fourier transform infrared (ATR-FTIR) microspectroscopy in combination with chemometric methods can reliably distinguish malignant colon tissues from healthy ones. It is important to explore a noninvasive and rapid method for detection of colon cancer biopsies. Initially, principal component analysis was applied to examine the degree of separation between tissue samples. Soft independent modeling of class analogy (SIMCA) was also employed to evaluate the prediction accuracy of ATR-FTIR microspectroscopy for the diagnosis of colon cancer. There were significant differences in the fourier transform infrared spectra of normal and cancerous colon biopsies in the 1,800-900 cm(-1) spectral region. The SIMCA results demonstrated that the accuracy, specificity, and sensitivity of the proposed diagnostic method were 93.3, 100, and 88.2%, respectively, which could help satisfy clinical diagnostic requirements.

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Year:  2008        PMID: 18989795     DOI: 10.1007/s12032-008-9118-3

Source DB:  PubMed          Journal:  Med Oncol        ISSN: 1357-0560            Impact factor:   3.064


  12 in total

Review 1.  Colon tumors and colonoscopy.

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3.  Diagnosis of basal cell carcinoma by infrared spectroscopy of whole blood samples applying soft independent modeling class analogy.

Authors:  Mohammadreza Khanmohammadi; Razieh Nasiri; Keyvan Ghasemi; Simin Samani; Amir Bagheri Garmarudi
Journal:  J Cancer Res Clin Oncol       Date:  2007-08-02       Impact factor: 4.553

Review 4.  Cutting cost and increasing access to colorectal cancer screening: another approach to following the guidelines.

Authors:  Judith A Fisher; Christopher Fikry; Andrea B Troxel
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2006-01       Impact factor: 4.254

5.  Human colon adenocarcinoma cell lines display infrared spectroscopic features of malignant colon tissues.

Authors:  B Rigas; P T Wong
Journal:  Cancer Res       Date:  1992-01-01       Impact factor: 12.701

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Journal:  Am Fam Physician       Date:  2001-04-01       Impact factor: 3.292

7.  Study on the secondary structure of protein in amide I band from human colon cancer tissue by Fourier-transform infrared spectroscopy.

Authors:  Y J Chen; Y W Hsieh; Y D Cheng; C C Liao
Journal:  Chang Gung Med J       Date:  2001-09

8.  Accuracy of detection of colorectal neoplasia using an immunochemical occult blood test in symptomatic referred patients: comparison of retrospective and prospective studies.

Authors:  H Miyoshi; M Oka; K Sugi; O Saitoh; K Katsu; K Uchida
Journal:  Intern Med       Date:  2000-09       Impact factor: 1.271

9.  Diagnostic potential of Fourier-transform infrared microspectroscopy and advanced computational methods in colon cancer patients.

Authors:  Shmuel Argov; Jagannathan Ramesh; Ahmad Salman; Igor Sinelnikov; Jed Goldstein; Hugo Guterman; Shaul Mordechai
Journal:  J Biomed Opt       Date:  2002-04       Impact factor: 3.170

10.  Cancer diagnosis by discrimination between normal and malignant human blood samples using attenuated total reflectance-Fourier transform infrared spectroscopy.

Authors:  M Khanmohammadi; M A Ansari; A Bagheri Garmarudi; G Hassanzadeh; G Garoosi
Journal:  Cancer Invest       Date:  2007-09       Impact factor: 2.176

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  4 in total

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Journal:  Biomed Res Int       Date:  2015-01-13       Impact factor: 3.411

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4.  Prediction of Ewing Sarcoma treatment outcome using attenuated tissue reflection FTIR tissue spectroscopy.

Authors:  Radosław Chaber; Kornelia Łach; Christopher J Arthur; Anna Raciborska; Elżbieta Michalak; Krzysztof Ciebiera; Katarzyna Bilska; Katarzyna Drabko; Józef Cebulski
Journal:  Sci Rep       Date:  2018-08-17       Impact factor: 4.379

  4 in total

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